Aliases for ENSG00000264340 Gene

Data sources for ENSG00000264340 Gene:

Subcategory (RNA class) for ENSG00000264340 Gene

lncRNA

Aliases for ENSG00000264340 Gene

External Ids for ENSG00000264340 Gene

Previous GeneCards Identifiers for ENSG00000264340 Gene

  • GC18M072228

Summaries for ENSG00000264340 Gene

GeneCards Summary for ENSG00000264340 Gene

ENSG00000264340 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000264340 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000264340 Gene

Genomics for ENSG00000264340 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000264340 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J074563 Enhancer 0.5 ENCODE 250.7 -1.5 -1479 2.7 CEBPA ZBTB7B RXRA ZNF585B HNF4A ZFP36 SP1 HNF4G YY1 ENSG00000264340 TSHZ1 HSALNG0122451 ZNF407 CNDP1
GH18J074564 Enhancer 0.3 Ensembl ENCODE 250.7 +0.7 741 1.2 ENSG00000264340 CNDP1 piR-51137-054 ZNF407
GH18J074540 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +20.9 20931 4 MXD4 CEBPA HOMEZ KDM6A THAP11 FOXA2 ZNF511 SMAD4 SAP130 RXRA TSHZ1 ZNF407 CNDP1 FAUP1 DIPK1C piR-51137-054 ENSG00000264340
GH18J074552 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +11.4 11434 0.6 CTCF REST TRIM22 SAP130 SMC3 RAD21 ZNF143 ELF3 RXRB ARID4B CNDP1 ENSG00000264340 piR-51137-054 ZNF407
GH18J074567 Enhancer 0.3 Ensembl 0.7 -5.0 -4959 1.4 RAD21 CTCF CNDP1 ZNF407-AS1 CYB5A ENSG00000264340 HSALNG0122451 ZNF407
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000264340 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000264340 Gene

Latest Assembly
chr18:74,555,587-74,563,342
(GRCh38/hg38)
Size:
7,756 bases
Orientation:
Minus strand

Previous Assembly
chr18:72,228,616-72,229,335
(GRCh37/hg19 by Ensembl)
Size:
720 bases
Orientation:
Minus strand

Genomic View for ENSG00000264340 Gene

Genes around ENSG00000264340 on UCSC Golden Path with GeneCards custom track
ENSG00000264340 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000264340 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000264340 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000264340 Gene

Proteins for ENSG00000264340 Gene

Post-translational modifications for ENSG00000264340 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000264340 Gene

Domains & Families for ENSG00000264340 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000264340 Gene

Function for ENSG00000264340 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000264340 Gene

Localization for ENSG00000264340 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000264340 Gene

Pathways & Interactions for ENSG00000264340 Gene

PathCards logo

SuperPathways for ENSG00000264340 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000264340 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000264340 Gene

Drugs & Compounds for ENSG00000264340 Gene

No Compound Related Data Available

Transcripts for ENSG00000264340 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000264340 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002008EE_9606 lncRNA 331 4

Ensembl: ENST00000583702 (view in UCSC) ,

LncBook: HSALNT0253114,

LNCipedia: lnc-FAM69C-1:1,

NONCODE: NONHSAT059875.2,

URS0001BF1B7C_9606 lncRNA 7186 1

LncBook: HSALNT0253113,

URS0001BF6B4B_9606 lncRNA 331 1

LncBook: HSALNT0253114,

ENSG00000264340 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000264340 Gene

No ASD Table

Relevant External Links for ENSG00000264340 Gene

GeneLoc Exon Structure for
ENSG00000264340

No data available for mRNA/cDNA for ENSG00000264340 Gene

Expression for ENSG00000264340 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000264340 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000264340 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x12.8), Brain - Substantia nigra (x9.1), Brain - Putamen (basal ganglia) (x5.1), Brain - Hippocampus (x4.9), and Brain - Hypothalamus (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000264340: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000264340 Gene

Orthologs for ENSG00000264340 Gene

Evolution for ENSG00000264340 Gene

ENSEMBL:
Gene Tree for ENSG00000264340 (if available)
TreeFam:
Gene Tree for ENSG00000264340 (if available)

No data available for Orthologs for ENSG00000264340 Gene

Paralogs for ENSG00000264340 Gene

No data available for Paralogs for ENSG00000264340 Gene

Variants for ENSG00000264340 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000264340 Gene

Disorders for ENSG00000264340 Gene

No disorders were found for ENSG00000264340 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000264340 Gene

Publications for ENSG00000264340 Gene

No publications were found for ENSG00000264340 Gene.

No data available for Mastermind for ENSG00000264340 Gene

Products for ENSG00000264340 Gene

Sources for ENSG00000264340 Gene