ENSG00000264272 Gene (RNA Gene)

 

GC17M074256
GIFtS:
8
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Aliases for ENSG00000264272 Gene

Data sources for ENSG00000264272 Gene:

Subcategory (RNA class) for ENSG00000264272 Gene

lncRNA

Aliases for ENSG00000264272 Gene

External Ids for ENSG00000264272 Gene

Previous GeneCards Identifiers for ENSG00000264272 Gene

  • GC17M072253

Summaries for ENSG00000264272 Gene

GeneCards Summary for ENSG00000264272 Gene

ENSG00000264272 is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ENSG00000264272 include Nasopharyngeal Carcinoma.

Additional gene information for ENSG00000264272 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000264272 Gene

Genomics for ENSG00000264272 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ENSG00000264272 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J074260 Enhancer 0.6 Ensembl ENCODE 250.7 +1.6 1648 1.6 ZIC2 ZNF341 CTCF GLIS1 ENSG00000264272 DNAI2 TTYH2 RF00017-2534
GH17J074262 Enhancer 0.5 Ensembl dbSUPER 250.7 -0.9 -852 0.2 ZIC2 EGR2 ENSG00000264272 DNAI2 HSALNG0118638 TTYH2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000264272 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000264272 Gene

Latest Assembly
chr17:74,256,637-74,262,249
(GRCh38/hg38)
Size:
5,613 bases
Orientation:
Minus strand

Previous Assembly
chr17:72,253,035-72,258,159
(GRCh37/hg19 by Ensembl)
Size:
5,125 bases
Orientation:
Minus strand

Genomic View for ENSG00000264272 Gene

Genes around ENSG00000264272 on UCSC Golden Path with GeneCards custom track
ENSG00000264272 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000264272 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000264272 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000264272 Gene

Proteins for ENSG00000264272 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for ENSG00000264272 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000264272 Gene

Domains & Families for ENSG00000264272 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000264272 Gene

Function for ENSG00000264272 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000264272 Gene

Localization for ENSG00000264272 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000264272 Gene

Pathways & Interactions for ENSG00000264272 Gene

PathCards logo

SuperPathways for ENSG00000264272 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000264272 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000264272 Gene

Drugs & Compounds for ENSG00000264272 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for ENSG00000264272 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000264272 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000185438_9606 lncRNA 513 3

Ensembl: ENST00000583018 (view in UCSC) ,

LNCipedia: lnc-BTBD17-2:1,

NONCODE: NONHSAT055779.2,

URS0001BF24E4_9606 lncRNA 1001 1

LncBook: HSALNT0245107,

ENSG00000264272 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000264272 Gene

No ASD Table

Relevant External Links for ENSG00000264272 Gene

GeneLoc Exon Structure for
ENSG00000264272

No data available for mRNA/cDNA for ENSG00000264272 Gene

Expression for ENSG00000264272 Gene

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  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000264272 Gene

mRNA expression in normal human tissues for ENSG00000264272 Gene
mRNA expression by GTEx for ENSG00000264272 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000264272 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x7.4) and Brain - Substantia nigra (x5.5).
genes like me logo Genes that share expression patterns with ENSG00000264272: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000264272 Gene

Orthologs for ENSG00000264272 Gene

Evolution for ENSG00000264272 Gene

ENSEMBL:
Gene Tree for ENSG00000264272 (if available)
TreeFam:
Gene Tree for ENSG00000264272 (if available)

No data available for Orthologs for ENSG00000264272 Gene

Paralogs for ENSG00000264272 Gene

No data available for Paralogs for ENSG00000264272 Gene

Variants for ENSG00000264272 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000264272 Gene

Disorders for ENSG00000264272 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000264272 Gene - From: LNC

Disorder Aliases PubMed IDs
nasopharyngeal carcinoma
  • npca
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000264272: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000264272 Gene

Publications for ENSG00000264272 Gene

  1. Curcumin enhances the radiosensitivity in nasopharyngeal carcinoma cells involving the reversal of differentially expressed long non-coding RNAs. (PMID: 24379026) Wang Q … Fan Q (International journal of oncology 2014) 74

No data available for Mastermind for ENSG00000264272 Gene

Products for ENSG00000264272 Gene

Sources for ENSG00000264272 Gene