Aliases for ENSG00000263938 Gene

Subcategory (RNA class) for ENSG00000263938 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000263938 Gene

  • Novel Transcript, Sense Intronic To PPM1E 5
  • NONHSAG022342.2 91
  • Lnc-PRR11-2 165
  • AC100832.2 5

External Ids for ENSG00000263938 Gene

Previous GeneCards Identifiers for ENSG00000263938 Gene

  • GC17P057044

Summaries for ENSG00000263938 Gene

GeneCards Summary for ENSG00000263938 Gene

ENSG00000263938 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000263938 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000263938 Gene

Genomics for ENSG00000263938 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000263938 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J058965 Enhancer 0.5 Ensembl 600.7 -0.3 -251 1 HNF4A ZNF664 REST ZNF362 ZNF384 ENSG00000263938 TRIM37 SEPTIN4 RF00017-2471 PPM1E
GH17J058966 Enhancer 0.3 Ensembl 600.7 +1.0 1048 0.8 PRDM6 ZNF362 ENSG00000263938 SEPTIN4 lnc-SKA2-5 TRIM37 PPM1E
GH17J058968 Enhancer 0.5 FANTOM5 ENCODE 0.7 +2.9 2894 0.3 MTA2 SEPTIN4 ENSG00000263938 lnc-SKA2-5 TRIM37 PPM1E
GH17J058991 Enhancer 0.8 ENCODE 0.3 +26.7 26734 3.1 BACH1 IKZF2 SP1 SCRT2 EED ARID3A DPF2 RELB JUND FOXA2 PPM1E MTMR4 ENSG00000212195 ENSG00000263938 lnc-SKA2-5 TRIM37
GH17J059000 Enhancer 0.8 ENCODE 0.3 +35.9 35942 2.7 ATF7 TEAD4 POLR2A BACH1 STAT3 RELA IKZF2 TRIM22 PKNOX1 EED RAD51C TRIM37 lnc-SKA2-5 ENSG00000263938 PPM1E
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000263938 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000263938 Gene

Genomic Locations for ENSG00000263938 Gene
chr17:58,965,952-58,966,727
(GRCh38/hg38)
Size:
776 bases
Orientation:
Plus strand
chr17:57,043,313-57,044,088
(GRCh37/hg19)
Size:
776 bases
Orientation:
Plus strand

Genomic View for ENSG00000263938 Gene

Genes around ENSG00000263938 on UCSC Golden Path with GeneCards custom track
ENSG00000263938 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000263938 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000263938 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000263938 Gene

Proteins for ENSG00000263938 Gene

Post-translational modifications for ENSG00000263938 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000263938 Gene

Domains & Families for ENSG00000263938 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000263938 Gene

Function for ENSG00000263938 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000263938 Gene

Localization for ENSG00000263938 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000263938 Gene

Pathways & Interactions for ENSG00000263938 Gene

PathCards logo

SuperPathways for ENSG00000263938 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000263938 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000263938 Gene

Drugs & Compounds for ENSG00000263938 Gene

No Compound Related Data Available

Transcripts for ENSG00000263938 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000263938 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000127AB6_9606 lncRNA 776 3

Ensembl: ENST00000582080 (view in UCSC) ,

LNCipedia: lnc-PRR11-2:1,

NONCODE: NONHSAT054988.2,

ENSG00000263938 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000263938 Gene

No ASD Table

Relevant External Links for ENSG00000263938 Gene

GeneLoc Exon Structure for
ENSG00000263938

No data available for mRNA/cDNA for ENSG00000263938 Gene

Expression for ENSG00000263938 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000263938 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000263938 Gene

This gene is overexpressed in Brain - Hippocampus (x10.8), Brain - Amygdala (x6.4), Brain - Anterior cingulate cortex (BA24) (x4.9), and Brain - Frontal Cortex (BA9) (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000263938: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000263938 Gene

Orthologs for ENSG00000263938 Gene

Evolution for ENSG00000263938 Gene

ENSEMBL:
Gene Tree for ENSG00000263938 (if available)
TreeFam:
Gene Tree for ENSG00000263938 (if available)

No data available for Orthologs for ENSG00000263938 Gene

Paralogs for ENSG00000263938 Gene

No data available for Paralogs for ENSG00000263938 Gene

Variants for ENSG00000263938 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000263938 Gene

Disorders for ENSG00000263938 Gene

Additional Disease Information for ENSG00000263938

No disorders were found for ENSG00000263938 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000263938 Gene

Publications for ENSG00000263938 Gene

No publications were found for ENSG00000263938 Gene.

No data available for Mastermind for ENSG00000263938 Gene

Products for ENSG00000263938 Gene

Sources for ENSG00000263938 Gene