Aliases for ENSG00000263916 Gene

Subcategory (RNA class) for ENSG00000263916 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000263916 Gene

  • Novel Transcript, Sense Intronic To C18orf32 5
  • NONHSAG023836.2 91
  • HSALNG0121482 164
  • Lnc-RPL17-1 165
  • AC100778.2 5

External Ids for ENSG00000263916 Gene

Previous GeneCards Identifiers for ENSG00000263916 Gene

  • GC18M047010

Summaries for ENSG00000263916 Gene

GeneCards Summary for ENSG00000263916 Gene

ENSG00000263916 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000263916 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000263916 Gene

Genomics for ENSG00000263916 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000263916 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J050297 Promoter/Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 4.4 -811.0 -810961 1 RFX1 GABPA SIN3A ELK1 ZXDB RUNX3 BMI1 ZBTB40 ZBTB48 ELF1 CFAP53 ENSG00000263916 MBD1 ENSG00000267695 CXXC1 SKA1
GH18J049274 Enhancer 0.8 Ensembl 5.3 +212.8 212784 0.8 JUND PHF21A ZIC2 ZNF24 ZNF740 BRD9 HDAC1 SOX6 FOXJ2 EP300 RPL17 DYM LOC100129878 ENSG00000263916 piR-41023 piR-59769-294 SMAD7
GH18J049485 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 -2.7 -2651 8.5 BRCA1 ARHGAP35 SP1 HNRNPL GATAD2A TEAD4 PRDM10 ZNF629 REST TFE3 C18orf32 SNORD58A SNORD58B SNORD58C RPL17 piR-33856 piR-33879 piR-43849-004 piR-61298 CXXC1
GH18J049621 Enhancer 0.2 Ensembl 5.1 -134.9 -134916 1.8 C18orf32 ENSG00000267674 ENSG00000263916 LOC105372112 SMUG1P1 lnc-LIPG-4 LIPG ACAA2
GH18J050398 Enhancer 0.2 CraniofacialAtlas 4.6 -910.9 -910946 1 SKA1 ENSG00000263916 LOC105372115 lnc-CXXC1-4 MAPK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000263916 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000263916 Gene

Genomic Locations for ENSG00000263916 Gene
chr18:49,481,677-49,487,185
(GRCh38/hg38)
Size:
5,509 bases
Orientation:
Minus strand
chr18:47,010,906-47,012,519
(GRCh37/hg19)
Size:
1,614 bases
Orientation:
Minus strand

Genomic View for ENSG00000263916 Gene

Genes around ENSG00000263916 on UCSC Golden Path with GeneCards custom track
ENSG00000263916 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000263916 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000263916 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000263916 Gene

Proteins for ENSG00000263916 Gene

Post-translational modifications for ENSG00000263916 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000263916 Gene

Domains & Families for ENSG00000263916 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000263916 Gene

Function for ENSG00000263916 Gene

Phenotypes From GWAS Catalog for ENSG00000263916 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000263916 Gene

Localization for ENSG00000263916 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000263916 Gene

Pathways & Interactions for ENSG00000263916 Gene

PathCards logo

SuperPathways for ENSG00000263916 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000263916 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000263916 Gene

Drugs & Compounds for ENSG00000263916 Gene

No Compound Related Data Available

Transcripts for ENSG00000263916 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000263916 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001C7081_9606 lncRNA 483 4

Ensembl: ENST00000580150 (view in UCSC) ,

LncBook: HSALNT0251130,

LNCipedia: lnc-RPL17-1:1,

NONCODE: NONHSAT059225.2,

URS00009BD932_9606 lncRNA 1401 2

LncBook: HSALNT0251127,

NONCODE: NONHSAT178476.1,

URS00009AE5B7_9606 lncRNA 958 2

LncBook: HSALNT0251128,

NONCODE: NONHSAT178477.1,

URS00009C3DDC_9606 lncRNA 879 2

LncBook: HSALNT0251125,

NONCODE: NONHSAT178474.1,

URS00009C302E_9606 lncRNA 780 2

LncBook: HSALNT0251126,

NONCODE: NONHSAT178475.1,

ENSG00000263916 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000263916 Gene

No ASD Table

Relevant External Links for ENSG00000263916 Gene

GeneLoc Exon Structure for
ENSG00000263916

No data available for mRNA/cDNA for ENSG00000263916 Gene

Expression for ENSG00000263916 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000263916 Gene

genes like me logo Genes that share expression patterns with ENSG00000263916: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000263916 Gene

Orthologs for ENSG00000263916 Gene

Evolution for ENSG00000263916 Gene

ENSEMBL:
Gene Tree for ENSG00000263916 (if available)
TreeFam:
Gene Tree for ENSG00000263916 (if available)

No data available for Orthologs for ENSG00000263916 Gene

Paralogs for ENSG00000263916 Gene

No data available for Paralogs for ENSG00000263916 Gene

Variants for ENSG00000263916 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000263916 Gene

Disorders for ENSG00000263916 Gene

No disorders were found for ENSG00000263916 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000263916 Gene

Publications for ENSG00000263916 Gene

No publications were found for ENSG00000263916 Gene.

No data available for Mastermind for ENSG00000263916 Gene

Products for ENSG00000263916 Gene

Sources for ENSG00000263916 Gene