Aliases for ENSG00000263620 Gene

Aliases for ENSG00000263620 Gene

  • V-SNARE Coiled-Coil Homology Domain-Containing Protein 13
  • Novel Protein 5
  • AC129492.3 5

External Ids for ENSG00000263620 Gene

Previous GeneCards Identifiers for ENSG00000263620 Gene

  • GC17M008075
  • GC17M008112
  • GC17M008183
  • GC17M008232
  • GC17M008267
  • GC17M008590
  • GC17M008627
  • GC17M008671
  • GC17M008764
  • GC17M008286
  • GC17M008337
  • GC17M008363
  • GC17M008410
  • GC17M008443
  • GC17M008484
  • GC17M008516
  • GC17M008549

Summaries for ENSG00000263620 Gene

GeneCards Summary for ENSG00000263620 Gene

ENSG00000263620 is a Protein Coding gene. An important paralog of this gene is VAMP2.

Additional gene information for ENSG00000263620 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000263620 Gene

Genomics for ENSG00000263620 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000263620 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J008149 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +5.7 5656 16 ZNF221 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 TEAD4 PRDM10 PER1 VAMP2 CYB5D1 CTC1 DVL2 PFAS ENSG00000265749 SENP3 TP53 NDEL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000263620 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000263620 Gene

Genomic Locations for ENSG00000263620 Gene
chr17:8,150,816-8,162,975
(GRCh38/hg38)
Size:
12,160 bases
Orientation:
Minus strand
chr17:8,054,134-8,066,293
(GRCh37/hg19)
Size:
12,160 bases
Orientation:
Minus strand

Genomic View for ENSG00000263620 Gene

Genes around ENSG00000263620 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000263620 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000263620 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000263620 Gene

Proteins for ENSG00000263620 Gene

  • Protein details for ENSG00000263620 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    L7N2F9-L7N2F9_HUMAN
    Recommended name:
    V-SNARE coiled-coil homology domain-containing protein
    Protein Accession:
    L7N2F9

    Protein attributes for ENSG00000263620 Gene

    Size:
    121 amino acids
    Molecular mass:
    13068 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000263620 Gene

Post-translational modifications for ENSG00000263620 Gene

No Post-translational modifications

Other Protein References for ENSG00000263620 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000263620 Gene

Domains & Families for ENSG00000263620 Gene

Gene Families for ENSG00000263620 Gene

Human Protein Atlas (HPA):
  • Predicted membrane proteins

Protein Domains for ENSG00000263620 Gene

genes like me logo Genes that share domains with ENSG00000263620: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000263620 Gene

Function for ENSG00000263620 Gene

Phenotypes From GWAS Catalog for ENSG00000263620 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000263620 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005484 SNAP receptor activity IBA --
GO:0017075 syntaxin-1 binding IBA --
GO:0019905 syntaxin binding IBA --
genes like me logo Genes that share ontologies with ENSG00000263620: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000263620 Gene

Localization for ENSG00000263620 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000263620 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IBA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
GO:0031201 SNARE complex IBA --
genes like me logo Genes that share ontologies with ENSG00000263620: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000263620 Gene

Pathways & Interactions for ENSG00000263620 Gene

PathCards logo

SuperPathways for ENSG00000263620 Gene

No Data Available

Interacting Proteins for ENSG00000263620 Gene

Gene Ontology (GO) - Biological Process for ENSG00000263620 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006906 vesicle fusion IBA --
GO:0016192 vesicle-mediated transport IEA --
GO:0035493 SNARE complex assembly IBA --
genes like me logo Genes that share ontologies with ENSG00000263620: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000263620 Gene

Drugs & Compounds for ENSG00000263620 Gene

No Compound Related Data Available

Transcripts for ENSG00000263620 Gene

mRNA/cDNA for ENSG00000263620 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000263620 Gene

No ASD Table

Relevant External Links for ENSG00000263620 Gene

GeneLoc Exon Structure for
ENSG00000263620

Expression for ENSG00000263620 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000263620 Gene

Orthologs for ENSG00000263620 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ENSG00000263620 Gene

Organism Taxonomy Gene Similarity Type Details
Cow
(Bos Taurus)
Mammalia VAMP2 31
  • 96 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Vamp2 31
  • 96 (a)
OneToMany
Chimpanzee
(Pan troglodytes)
Mammalia VAMP2 31
  • 94 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 91 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia -- 31
  • 93 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii vamp2 31
  • 87 (a)
OneToMany
Fruit Fly
(Drosophila melanogaster)
Insecta Syb 31
  • 44 (a)
ManyToMany
n-syb 31
  • 37 (a)
ManyToMany
Worm
(Caenorhabditis elegans)
Secernentea snb-1 31
  • 69 (a)
OneToMany
Baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes SNC1 31
  • 31 (a)
ManyToMany
SNC2 31
  • 29 (a)
ManyToMany
Species where no ortholog for ENSG00000263620 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)

Evolution for ENSG00000263620 Gene

ENSEMBL:
Gene Tree for ENSG00000263620 (if available)
TreeFam:
Gene Tree for ENSG00000263620 (if available)

Paralogs for ENSG00000263620 Gene

Paralogs for ENSG00000263620 Gene

genes like me logo Genes that share paralogs with ENSG00000263620: view

Variants for ENSG00000263620 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000263620 Gene

Disorders for ENSG00000263620 Gene

Additional Disease Information for ENSG00000263620

No disorders were found for ENSG00000263620 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000263620 Gene

Publications for ENSG00000263620 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody MC … Nusbaum C (Nature 2006) 13

No data available for Mastermind for ENSG00000263620 Gene

Products for ENSG00000263620 Gene

Sources for ENSG00000263620 Gene