Aliases for ENSG00000262920 Gene

Subcategory (RNA class) for ENSG00000262920 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for ENSG00000262920 Gene

  • Novel Transcript, Antisense To RPH3AL 5
  • Lnc-C17orf97-4 170
  • HSALNG0113716 169
  • NONHSAG020404 94
  • AC129507.4 5

External Ids for ENSG00000262920 Gene

Additional External Ids for ENSG00000262920 Gene

Previous GeneCards Identifiers for ENSG00000262920 Gene

  • GC17P000171

Summaries for ENSG00000262920 Gene

GeneCards Summary for ENSG00000262920 Gene

ENSG00000262920 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262920 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262920 Gene

Genomics for ENSG00000262920 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000262920 Gene

Promoters and enhancers for ENSG00000262920 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J000321 Enhancer 1 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.5 -501 1.4 SP1 ZIC2 POLR2A NRF1 GLIS1 ENSG00000262920 lnc-DOC2B-2 LINC02091 lnc-DOC2B-3-001 RPH3AL
GH17J000323 Enhancer 0.3 Ensembl dbSUPER 758.3 +1.6 1609 0.4 ENSG00000262920 LOC100506388 lnc-DOC2B-3-001 RPH3AL
GH17J000975 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12.4 +657.0 657032 6.7 CTCF MIXL1 L3MBTL2 ZNF121 RAD21 POLR2A MNT NKRF ELF3 AHR NXN lnc-ABR-6-001 PRPF8 WDR81 SMYD4 ENSG00000262920 GEMIN4 GLOD4 MRM3 ENSG00000262228
GH17J001258 Enhancer 1 ENCODE 22.2 +937.8 937760 1.1 GTF3C2 ZNF785 CTCF CC2D1A L3MBTL2 RAD21 ZNF121 ZNF280D BCL6B ZNF148 PRPF8 SMYD4 WDR81 RPA1 GEMIN4 ENSG00000262228 ENSG00000262920 DPH1 MYO1C ENSG00000263050
GH17J001227 Promoter/Enhancer 1.2 Ensembl ENCODE 12.4 +907.7 907709 4.2 ZBTB6 POLR2A ETV6 RELA L3MBTL2 MAX BCL6B NKRF MLLT1 SP7 ABR lnc-ABR-2 PRPF8 WDR81 SMYD4 ENSG00000262920 GEMIN4 DPH1 ENSG00000262228 ENSG00000262003
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262920 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000262920 Gene

Genomic Locations for ENSG00000262920 Gene
chr17:321,392-322,453
(GRCh38/hg38)
Size:
1,062 bases
Orientation:
Plus strand
chr17:171,183-172,244
(GRCh37/hg19)
Size:
1,062 bases
Orientation:
Plus strand

Genomic View for ENSG00000262920 Gene

Genes around ENSG00000262920 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000262920 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262920 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262920 Gene

Proteins for ENSG00000262920 Gene

Post-translational modifications for ENSG00000262920 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262920 Gene

Domains & Families for ENSG00000262920 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262920 Gene

Function for ENSG00000262920 Gene

Phenotypes From GWAS Catalog for ENSG00000262920 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262920 Gene

Localization for ENSG00000262920 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262920 Gene

Pathways & Interactions for ENSG00000262920 Gene

PathCards logo

SuperPathways for ENSG00000262920 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000262920 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000262920 Gene

Drugs & Compounds for ENSG00000262920 Gene

No Compound Related Data Available

Transcripts for ENSG00000262920 Gene

mRNA/cDNA for ENSG00000262920 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(2) LNCipedia transcripts :
(3) LncBook transcripts :
(3) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262920 Gene

No ASD Table

Relevant External Links for ENSG00000262920 Gene

GeneLoc Exon Structure for
ENSG00000262920

Expression for ENSG00000262920 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000262920 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000262920 Gene

This gene is overexpressed in Pituitary (x16.2), Kidney - Cortex (x5.3), and Pancreas (x5.2).
genes like me logo Genes that share expression patterns with ENSG00000262920: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262920 Gene

Orthologs for ENSG00000262920 Gene

Evolution for ENSG00000262920 Gene

ENSEMBL:
Gene Tree for ENSG00000262920 (if available)
TreeFam:
Gene Tree for ENSG00000262920 (if available)

No data available for Orthologs for ENSG00000262920 Gene

Paralogs for ENSG00000262920 Gene

No data available for Paralogs for ENSG00000262920 Gene

Variants for ENSG00000262920 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000262920 Gene

Disorders for ENSG00000262920 Gene

No disorders were found for ENSG00000262920 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000262920 Gene

Publications for ENSG00000262920 Gene

No publications were found for ENSG00000262920 Gene.

No data available for External Links for ENSG00000262920 Gene

Products for ENSG00000262920 Gene

Sources for ENSG00000262920 Gene