Aliases for ENSG00000262877 Gene

Data sources for ENSG00000262877 Gene:

RNA type for ENSG00000262877 Gene

lncRNA

Aliases for ENSG00000262877 Gene

External Ids for ENSG00000262877 Gene

Summaries for ENSG00000262877 Gene

GeneCards Summary for ENSG00000262877 Gene

ENSG00000262877 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262877 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262877 Gene

Genomics for ENSG00000262877 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000262877 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J081384 Promoter/Enhancer 2.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 64.2 -2.0 -2011 22.5 SP1 MYC NCOR1 ZNF600 IKZF1 ZNF580 ZNF592 ZMYM3 ATF2 KLF9 BAHCC1 ENSG00000279692 lnc-BAHCC1-3 lnc-TMEM105-4 ENSG00000262877 FAAP100 ENSG00000265678 CCDC57 CEP131 HGS
GH17J082095 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 29.7 -707.4 -707427 12.8 BCLAF1 SP1 ZNF207 MYC IKZF1 ZNF600 SSRP1 ZNF592 ZMYM3 KLF9 FASN HSALNG0119369 HSALNG0119370 HSALNG0119371 HSALNG0119372 piR-33494 CCDC57 TBCD ENSG00000262877 CEP131
GH17J081864 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 21.6 -474.9 -474894 8.9 BCLAF1 SP1 ZNF207 MYC IKZF1 NCOR1 ZNF600 SSRP1 JUND ZNF592 ARHGDIA ENSG00000262413 HSALNG0119323 HSALNG0119324 lnc-ARHGDIA-1 TBCD FAAP100 ENSG00000265678 HGS NARF-IT1
GH17J082211 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 20.5 -821.9 -821889 8.7 BCLAF1 SP1 ZNF207 MYC ZNF600 IKZF1 SIX5 SSRP1 JUND ZNF580 CCDC57 HSALNG0119388 lnc-CCDC57-1 SLC16A3 TBCD CEP131 FAAP100 NARF-IT1 HGS CSNK1D
GH17J081709 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 20.8 -318.3 -318266 4.7 BCLAF1 SP1 ZNF207 MYC IKZF1 ZNF600 JUND ZNF580 ZNF592 ZMYM3 SLC25A10 lnc-ARL16-3 ARL16 HGS NARF-IT1 ALYREF RFNG ENSG00000260563 FAAP100 ENSG00000262652
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262877 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000262877 Gene

Latest Assembly
chr17:81,380,223-81,394,049
(GRCh38/hg38)
Size:
13,827 bases
Orientation:
Minus strand

Previous Assembly
chr17:79,361,930-79,364,056
(GRCh37/hg19 by Ensembl)
Size:
2,127 bases
Orientation:
Minus strand

Genomic View for ENSG00000262877 Gene

Genes around ENSG00000262877 on UCSC Golden Path with GeneCards custom track
ENSG00000262877 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000262877 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262877 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262877 Gene

Proteins for ENSG00000262877 Gene

Post-translational modifications for ENSG00000262877 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262877 Gene

Domains & Families for ENSG00000262877 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262877 Gene

Function for ENSG00000262877 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262877 Gene

Localization for ENSG00000262877 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262877 Gene

Pathways & Interactions for ENSG00000262877 Gene

PathCards logo

SuperPathways for ENSG00000262877 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000262877 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000262877 Gene

Drugs & Compounds for ENSG00000262877 Gene

No Compound Related Data Available

Transcripts for ENSG00000262877 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000262877 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00002489C6_9606 lncRNA 414 4

Ensembl: ENST00000608155 (view in UCSC) ,

LncBook: HSALNT0246196,

LNCipedia: lnc-TMEM105-2:34,

NONCODE: NONHSAT176658.1,

URS00007716E5_9606 lncRNA 1565 2

Ensembl: ENST00000571724 (view in UCSC) ,

LNCipedia: lnc-TMEM105-2:33,

URS0000EF58F0_9606 lncRNA 977 1

Ensembl: ENST00000662306 (view in UCSC) ,

URS00008B694A_9606 lncRNA 6222 2

LNCipedia: lnc-TMEM105-2:22,

NONCODE: NONHSAT056484.2,

URS00008C1696_9606 lncRNA 4739 2

LNCipedia: lnc-TMEM105-2:30,

NONCODE: NONHSAT056485.2,

ENSG00000262877 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262877 Gene

No ASD Table

Relevant External Links for ENSG00000262877 Gene

GeneLoc Exon Structure for
ENSG00000262877

No data available for mRNA/cDNA for ENSG00000262877 Gene

Expression for ENSG00000262877 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000262877 Gene

genes like me logo Genes that share expression patterns with ENSG00000262877: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262877 Gene

Orthologs for ENSG00000262877 Gene

Evolution for ENSG00000262877 Gene

ENSEMBL:
Gene Tree for ENSG00000262877 (if available)
TreeFam:
Gene Tree for ENSG00000262877 (if available)

No data available for Orthologs for ENSG00000262877 Gene

Paralogs for ENSG00000262877 Gene

No data available for Paralogs for ENSG00000262877 Gene

Variants for ENSG00000262877 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000262877 Gene

Disorders for ENSG00000262877 Gene

Additional Disease Information for ENSG00000262877

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000262877 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000262877 Gene

Publications for ENSG00000262877 Gene

No publications were found for ENSG00000262877 Gene.

No data available for Mastermind for ENSG00000262877 Gene

Products for ENSG00000262877 Gene

Sources for ENSG00000262877 Gene