Aliases for ENSG00000262721 Gene

Subcategory (RNA class) for ENSG00000262721 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000262721 Gene

  • Novel Transcript 5
  • NONHSAG019122.2 91
  • HSALNG0110785 164
  • Lnc-BCL7C-1 165
  • AC135048.2 5

External Ids for ENSG00000262721 Gene

Previous GeneCards Identifiers for ENSG00000262721 Gene

  • GC16M030887

Summaries for ENSG00000262721 Gene

GeneCards Summary for ENSG00000262721 Gene

ENSG00000262721 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262721 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262721 Gene

Genomics for ENSG00000262721 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000262721 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J030892 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.6 586 5.1 BRCA1 ARHGAP35 CEBPG GATAD2A PRDM10 TFE3 SIX5 IKZF1 KDM1A CTCF BCL7C CTF1 ENSG00000262721 MIR762 ENSG00000260267 SRCAP INO80E SETD1A FUS SMG1P5
GH16J030872 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 +20.9 20886 5.3 SP1 HNRNPL CREB1 GATAD2A PRDM10 ZNF629 TFE3 LEF1 IKZF1 NFKBIZ MIR762HG MIR4519 RNF40 SETD1A BCL7C SRCAP TAOK2 KAT8 ENSG00000260267 NPIPB13
GH16J030893 Promoter/Enhancer 0.6 Ensembl dbSUPER 0.7 +3.3 3270 0.2 ZNF600 MIR762 ZNF629 BCL7C ENSG00000262721 MIR4519 MIR762HG
GH16J030881 Enhancer 0.8 Ensembl ENCODE 0.4 +13.5 13470 2.6 ZNF692 RFX1 ZIC2 ZNF600 ZNF341 SCRT2 BMI1 ZNF189 SPI1 ZNF384 CCDC189 SNORA30 SRCAP MIR4519 MIR762HG ENSG00000262721 BCL7C MIR762 ZNF629
GH16J030813 Promoter/Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas 0.2 +81.6 81579 2.1 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 PRDM10 ZNF629 TFE3 ENSG00000274848 lnc-RNF40-5 SRCAP INO80E RNF40 ZNF764 SETD1A FUS HSD3B7 FBRS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262721 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000262721 Gene

Genomic Locations for ENSG00000262721 Gene
chr16:30,805,490-30,895,771
(GRCh38/hg38)
Size:
90,282 bases
Orientation:
Minus strand
chr16:30,887,087-30,906,537
(GRCh37/hg19)
Size:
19,451 bases
Orientation:
Minus strand

Genomic View for ENSG00000262721 Gene

Genes around ENSG00000262721 on UCSC Golden Path with GeneCards custom track
ENSG00000262721 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000262721 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262721 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262721 Gene

Proteins for ENSG00000262721 Gene

Post-translational modifications for ENSG00000262721 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262721 Gene

Domains & Families for ENSG00000262721 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262721 Gene

Function for ENSG00000262721 Gene

Phenotypes From GWAS Catalog for ENSG00000262721 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262721 Gene

Localization for ENSG00000262721 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262721 Gene

Pathways & Interactions for ENSG00000262721 Gene

PathCards logo

SuperPathways for ENSG00000262721 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000262721 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000262721 Gene

Drugs & Compounds for ENSG00000262721 Gene

No Compound Related Data Available

Transcripts for ENSG00000262721 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000262721 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000008E752_9606 lncRNA 561 4

Ensembl: ENST00000572471 (view in UCSC) ,

LncBook: HSALNT0229808,

LNCipedia: lnc-BCL7C-1:1,

NONCODE: NONHSAT141822.2,

URS00009C3248_9606 lncRNA 1838 3

LncBook: HSALNT0229791,

LNCipedia: lnc-BCL7C-1:3,

NONCODE: NONHSAT141816.2,

URS00009BB501_9606 lncRNA 3635 2

LNCipedia: lnc-BCL7C-1:2,

NONCODE: NONHSAT173770.1,

URS00009B593C_9606 lncRNA 755 1

NONCODE: NONHSAT173769.1,

URS0000D6E245_9606 lncRNA 552 1

LNCipedia: lnc-BCL7C-1:4,

ENSG00000262721 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262721 Gene

No ASD Table

Relevant External Links for ENSG00000262721 Gene

GeneLoc Exon Structure for
ENSG00000262721

No data available for mRNA/cDNA for ENSG00000262721 Gene

Expression for ENSG00000262721 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262721 Gene

Orthologs for ENSG00000262721 Gene

Evolution for ENSG00000262721 Gene

ENSEMBL:
Gene Tree for ENSG00000262721 (if available)
TreeFam:
Gene Tree for ENSG00000262721 (if available)

No data available for Orthologs for ENSG00000262721 Gene

Paralogs for ENSG00000262721 Gene

No data available for Paralogs for ENSG00000262721 Gene

Variants for ENSG00000262721 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000262721 Gene

Disorders for ENSG00000262721 Gene

No disorders were found for ENSG00000262721 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000262721 Gene

Publications for ENSG00000262721 Gene

No publications were found for ENSG00000262721 Gene.

No data available for Mastermind for ENSG00000262721 Gene

Products for ENSG00000262721 Gene

Sources for ENSG00000262721 Gene