Aliases for ENSG00000262662 Gene

Subcategory (RNA class) for ENSG00000262662 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000262662 Gene

  • Novel Transcript, Antisense To RPTOR 5
  • HSALNG0119217 167
  • NONHSAG022965 92
  • AC127496.4 5
  • Lnc-AATK-7 168

External Ids for ENSG00000262662 Gene

Previous GeneCards Identifiers for ENSG00000262662 Gene

  • GC17M078934

Summaries for ENSG00000262662 Gene

GeneCards Summary for ENSG00000262662 Gene

ENSG00000262662 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262662 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262662 Gene

Genomics for ENSG00000262662 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000262662 Gene

Promoters and enhancers for ENSG00000262662 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J080958 Enhancer 0.8 ENCODE dbSUPER 500.7 +0.9 932 4.4 JUND CTCF ZIC2 GABPA MXI1 NR2F2 MYC POLR2G POLR2A RBM22 ENSG00000262662 CHMP6 RPTOR CEP131 ENSG00000262313 lnc-TMEM105-1
GH17J080968 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -7.8 -7787 4.2 CTCF POLR2G ZIC2 ZNF623 GABPA TGIF2 RAD21 SMC3 MXI1 ZNF341 ENSG00000261924 LOC400627 CHMP6 ENSG00000262662 lnc-TMEM105-1
GH17J080964 Enhancer 0.6 Ensembl dbSUPER 0.7 -4.0 -3988 0.2 POLR2G RBM22 KLF1 AGO2 CHMP6 ENSG00000262662 ENSG00000261924 lnc-TMEM105-1 RPTOR
GH17J080942 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +18.9 18865 2.7 CTCF RBM22 RAD21 NFATC1 PBX3 BCL3 CEBPB ENSG00000262313 ENSG00000262662 RPTOR lnc-TMEM105-1
GH17J080966 Enhancer 0.6 Ensembl dbSUPER 0.4 -5.3 -5288 0.4 POLR2G RBM22 TAF15 SSRP1 POLR2A AGO2 CHMP6 ENSG00000261924 ENSG00000262662 lnc-TMEM105-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262662 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000262662 Gene

Genomic Locations for ENSG00000262662 Gene
chr17:80,960,766-80,961,713
(GRCh38/hg38)
Size:
948 bases
Orientation:
Minus strand
chr17:78,934,566-78,935,513
(GRCh37/hg19)
Size:
948 bases
Orientation:
Minus strand

Genomic View for ENSG00000262662 Gene

Genes around ENSG00000262662 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000262662 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262662 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262662 Gene

Proteins for ENSG00000262662 Gene

Post-translational modifications for ENSG00000262662 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262662 Gene

Domains & Families for ENSG00000262662 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262662 Gene

Function for ENSG00000262662 Gene

Phenotypes From GWAS Catalog for ENSG00000262662 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262662 Gene

Localization for ENSG00000262662 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262662 Gene

Pathways & Interactions for ENSG00000262662 Gene

PathCards logo

SuperPathways for ENSG00000262662 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000262662 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000262662 Gene

Drugs & Compounds for ENSG00000262662 Gene

No Compound Related Data Available

Transcripts for ENSG00000262662 Gene

mRNA/cDNA for ENSG00000262662 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262662 Gene

No ASD Table

Relevant External Links for ENSG00000262662 Gene

GeneLoc Exon Structure for
ENSG00000262662

Expression for ENSG00000262662 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000262662 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000262662 Gene

This gene is overexpressed in Colon - Sigmoid (x4.6) and Spleen (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000262662: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262662 Gene

Orthologs for ENSG00000262662 Gene

Evolution for ENSG00000262662 Gene

ENSEMBL:
Gene Tree for ENSG00000262662 (if available)
TreeFam:
Gene Tree for ENSG00000262662 (if available)

No data available for Orthologs for ENSG00000262662 Gene

Paralogs for ENSG00000262662 Gene

No data available for Paralogs for ENSG00000262662 Gene

Variants for ENSG00000262662 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000262662 Gene

Disorders for ENSG00000262662 Gene

No disorders were found for ENSG00000262662 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000262662 Gene

Publications for ENSG00000262662 Gene

No publications were found for ENSG00000262662 Gene.

No data available for Mastermind for ENSG00000262662 Gene

Products for ENSG00000262662 Gene

Sources for ENSG00000262662 Gene