Aliases for ENSG00000262456 Gene

Subcategory (RNA class) for ENSG00000262456 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000262456 Gene

  • Novel Transcript, Antisense To MNT 5
  • HSALNG0113909 167
  • NONHSAG020503 92
  • Lnc-SGSM2-1 168
  • AC006435.1 5

External Ids for ENSG00000262456 Gene

Previous GeneCards Identifiers for ENSG00000262456 Gene

  • GC17P002288

Summaries for ENSG00000262456 Gene

GeneCards Summary for ENSG00000262456 Gene

ENSG00000262456 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262456 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262456 Gene

Genomics for ENSG00000262456 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000262456 Gene

Promoters and enhancers for ENSG00000262456 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J002382 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.3 -346 5.4 CTCF TRIM28 REST RAD21 TRIM22 SMC3 BCL11A ZBTB17 ZNF76 ZNF524 ENSG00000262456 SGSM2 TSR1 SNORD91A SNORD91B ENSG00000263345 MNT
GH17J002379 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -4.2 -4193 2 MXI1 POLR2A POLR2G RBM22 SMARCA4 AGO2 GATA2 ENSG00000263345 SGSM2 TSR1 SNORD91A SNORD91B ENSG00000262456
GH17J002388 Enhancer 0.6 ENCODE dbSUPER 0.7 +3.9 3948 0.8 ZNF662 RBM22 CTCF GATA3 GATA2 POLR2A METTL16 HNRNPA1P16 DPH1 SMYD4 PRPF8 SMG6 RPA1 MNT ENSG00000262456 lnc-METTL16-2
GH17J002390 Enhancer 0.3 ENCODE dbSUPER 0.7 +4.8 4752 0.1 SRR ENSG00000262456 lnc-METTL16-2 MNT lnc-METTL16-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262456 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000262456 Gene

Genomic Locations for ENSG00000262456 Gene
chr17:2,384,847-2,386,664
(GRCh38/hg38)
Size:
1,818 bases
Orientation:
Plus strand
chr17:2,288,141-2,289,958
(GRCh37/hg19)
Size:
1,818 bases
Orientation:
Plus strand

Genomic View for ENSG00000262456 Gene

Genes around ENSG00000262456 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000262456 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262456 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262456 Gene

Proteins for ENSG00000262456 Gene

Post-translational modifications for ENSG00000262456 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262456 Gene

Domains & Families for ENSG00000262456 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262456 Gene

Function for ENSG00000262456 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262456 Gene

Localization for ENSG00000262456 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262456 Gene

Pathways & Interactions for ENSG00000262456 Gene

PathCards logo

SuperPathways for ENSG00000262456 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000262456 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000262456 Gene

Drugs & Compounds for ENSG00000262456 Gene

No Compound Related Data Available

Transcripts for ENSG00000262456 Gene

mRNA/cDNA for ENSG00000262456 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262456 Gene

No ASD Table

Relevant External Links for ENSG00000262456 Gene

GeneLoc Exon Structure for
ENSG00000262456

Expression for ENSG00000262456 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000262456 Gene

genes like me logo Genes that share expression patterns with ENSG00000262456: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262456 Gene

Orthologs for ENSG00000262456 Gene

Evolution for ENSG00000262456 Gene

ENSEMBL:
Gene Tree for ENSG00000262456 (if available)
TreeFam:
Gene Tree for ENSG00000262456 (if available)

No data available for Orthologs for ENSG00000262456 Gene

Paralogs for ENSG00000262456 Gene

No data available for Paralogs for ENSG00000262456 Gene

Variants for ENSG00000262456 Gene

Variation tolerance for ENSG00000262456 Gene

Gene Damage Index Score: 4.10; 61.07% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000262456 Gene

Disorders for ENSG00000262456 Gene

No disorders were found for ENSG00000262456 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000262456 Gene

Publications for ENSG00000262456 Gene

No publications were found for ENSG00000262456 Gene.

No data available for Mastermind for ENSG00000262456 Gene

Products for ENSG00000262456 Gene

Sources for ENSG00000262456 Gene