Aliases for ENSG00000262231 Gene

Subcategory (RNA class) for ENSG00000262231 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000262231 Gene

  • Novel Transcript 5
  • NONHSAG020650.2 91
  • HSALNG0114168 164
  • Lnc-AIPL1-2 165
  • AC104770.1 5

External Ids for ENSG00000262231 Gene

Previous GeneCards Identifiers for ENSG00000262231 Gene

  • GC17M006092
  • GC17M006189

Summaries for ENSG00000262231 Gene

GeneCards Summary for ENSG00000262231 Gene

ENSG00000262231 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262231 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262231 Gene

Genomics for ENSG00000262231 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000262231 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J006190 Enhancer 0.5 Ensembl 609.6 -1.0 -1047 1.6 SOX6 FOSL1 EZH2 TAL1 TCF12 JUN CBFA2T2 CBFA2T3 ARID1B ENSG00000262231 LOC105371508 RF00026-414 RNU6-1264P WSCD1 AIPL1
GH17J006187 Enhancer 0.7 Ensembl ENCODE 8.8 +2.8 2753 1.6 CREB1 POLR2A SCRT2 PKNOX1 SCRT1 HIC1 EZH2 GLIS1 FOS ENSG00000262231 LOC105371508 piR-32861-028 WSCD1 AIPL1
GH17J006177 Enhancer 0.8 FANTOM5 Ensembl ENCODE 5.5 +11.5 11453 3 CREB1 NR2F2 JUN POLR2A RAD21 CTCF ENSG00000262231 WSCD1 piR-32861-028 LOC105371508 AIPL1
GH17J006162 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +27.9 27938 3.6 ZNF629 ZNF692 ZIC2 PATZ1 ZNF341 ZNF37A ZNF561 ZBTB44 ZBTB20 ZSCAN29 RPAIN ZNF594 ENSG00000261879 ENSG00000262089 MIS12 DHX33 ENSG00000263272 ENSG00000263220 ENSG00000263164 ALOX12-AS1
GH17J006166 Enhancer 0.4 Ensembl dbSUPER 0.4 +23.9 23854 0.6 REST piR-32861-028 ENSG00000262231 LOC105371508 piR-31158 WSCD1 AIPL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262231 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000262231 Gene

Genomic Locations for ENSG00000262231 Gene
chr17:6,163,893-6,190,554
(GRCh38/hg38)
Size:
26,662 bases
Orientation:
Minus strand
chr17:6,092,681-6,093,861
(GRCh37/hg19)
Size:
1,181 bases
Orientation:
Minus strand

Genomic View for ENSG00000262231 Gene

Genes around ENSG00000262231 on UCSC Golden Path with GeneCards custom track
ENSG00000262231 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000262231 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262231 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262231 Gene

Proteins for ENSG00000262231 Gene

Post-translational modifications for ENSG00000262231 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262231 Gene

Domains & Families for ENSG00000262231 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262231 Gene

Function for ENSG00000262231 Gene

Phenotypes From GWAS Catalog for ENSG00000262231 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262231 Gene

Localization for ENSG00000262231 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262231 Gene

Pathways & Interactions for ENSG00000262231 Gene

PathCards logo

SuperPathways for ENSG00000262231 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000262231 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000262231 Gene

Drugs & Compounds for ENSG00000262231 Gene

No Compound Related Data Available

Transcripts for ENSG00000262231 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000262231 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF50D2_9606 lncRNA 687 1

Ensembl: ENST00000664051 (view in UCSC) ,

URS0000EF4DF1_9606 lncRNA 439 1

Ensembl: ENST00000573698 (view in UCSC) ,

URS00008BBFB3_9606 lncRNA 380 3

LncBook: HSALNT0236498,

LNCipedia: lnc-AIPL1-2:5,

NONCODE: NONHSAT145247.2,

URS00008C0576_9606 lncRNA 266 3

LncBook: HSALNT0236493,

LNCipedia: lnc-AIPL1-2:6,

NONCODE: NONHSAT145244.2,

URS00008B3DC1_9606 lncRNA 263 3

LncBook: HSALNT0236494,

LNCipedia: lnc-AIPL1-2:2,

NONCODE: NONHSAT145245.2,

ENSG00000262231 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ENSG00000262231 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262231 Gene

No ASD Table

Relevant External Links for ENSG00000262231 Gene

GeneLoc Exon Structure for
ENSG00000262231

Expression for ENSG00000262231 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000262231 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000262231 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000262231: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262231 Gene

Orthologs for ENSG00000262231 Gene

Evolution for ENSG00000262231 Gene

ENSEMBL:
Gene Tree for ENSG00000262231 (if available)
TreeFam:
Gene Tree for ENSG00000262231 (if available)

No data available for Orthologs for ENSG00000262231 Gene

Paralogs for ENSG00000262231 Gene

No data available for Paralogs for ENSG00000262231 Gene

Variants for ENSG00000262231 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000262231 Gene

Disorders for ENSG00000262231 Gene

Additional Disease Information for ENSG00000262231

No disorders were found for ENSG00000262231 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000262231 Gene

Publications for ENSG00000262231 Gene

No publications were found for ENSG00000262231 Gene.

No data available for Mastermind for ENSG00000262231 Gene

Products for ENSG00000262231 Gene

Sources for ENSG00000262231 Gene