Aliases for ENSG00000262211 Gene

Subcategory (RNA class) for ENSG00000262211 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000262211 Gene

  • Novel Transcript, Antisense To IL6ST 5
  • NONHSAG040408.2 91
  • HSALNG0041918 164
  • AC008914.1 5

External Ids for ENSG00000262211 Gene

Previous GeneCards Identifiers for ENSG00000262211 Gene

  • GC05P055232

Summaries for ENSG00000262211 Gene

GeneCards Summary for ENSG00000262211 Gene

ENSG00000262211 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262211 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262211 Gene

Genomics for ENSG00000262211 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000262211 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J055933 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 -1.9 -1872 2.3 CREB1 GATAD2A ATF7 REST TFE3 SOX13 NFKBIZ RCOR2 TARDBP ZHX2 ENSG00000262211 ENSG00000238326 RNA5SP183 SLC38A9 DDX4 RPL26P19 piR-41405-019 IL6ST lnc-SLC38A9-4 IL31RA
GH05J055936 Enhancer 0.9 ENCODE dbSUPER 600.7 +0.1 145 0.2 CTCF REST RAD21 IRF2 TRIM22 YY1 SP1 RUNX3 BCLAF1 SMC3 ENSG00000262211 RPL26P19 lnc-ANKRD55-6 IL6ST lnc-SLC38A9-4 IL31RA
GH05J055937 Enhancer 0.4 Ensembl 600.7 +0.7 657 0.4 CTCF YY1 ZBTB17 ZNF362 ENSG00000262211 lnc-ANKRD55-6 IL6ST lnc-SLC38A9-4 IL31RA
GH05J055923 Enhancer 0.7 ENCODE dbSUPER 0.4 -12.7 -12676 0.6 IKZF2 EED GABPA IKZF1 JUN POLR2A HSF1 ZNF687 IL31RA RNA5SP183 SLC38A9 DDX4 ENSG00000262211 piR-41405-019 IL6ST lnc-SLC38A9-4
GH05J055917 Enhancer 0.7 Ensembl 0.4 -18.1 -18142 0.8 RFX1 GABPA RFX3 NR2C2 TEAD1 CTCF NR2F2 SAP130 NR2F1 GABPB1 IL31RA LINC01948 piR-41405-019 ENSG00000262211 IL6ST lnc-SLC38A9-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262211 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000262211 Gene

Genomic Locations for ENSG00000262211 Gene
chr5:55,936,143-55,941,727
(GRCh38/hg38)
Size:
5,585 bases
Orientation:
Plus strand
chr5:55,231,971-55,237,555
(GRCh37/hg19)
Size:
5,585 bases
Orientation:
Plus strand

Genomic View for ENSG00000262211 Gene

Genes around ENSG00000262211 on UCSC Golden Path with GeneCards custom track
ENSG00000262211 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000262211 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262211 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262211 Gene

Proteins for ENSG00000262211 Gene

Post-translational modifications for ENSG00000262211 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262211 Gene

Domains & Families for ENSG00000262211 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262211 Gene

Function for ENSG00000262211 Gene

Phenotypes From GWAS Catalog for ENSG00000262211 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262211 Gene

Localization for ENSG00000262211 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262211 Gene

Pathways & Interactions for ENSG00000262211 Gene

PathCards logo

SuperPathways for ENSG00000262211 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000262211 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000262211 Gene

Drugs & Compounds for ENSG00000262211 Gene

No Compound Related Data Available

Transcripts for ENSG00000262211 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000262211 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005C19BF_9606 lncRNA 797 3

Ensembl: ENST00000576302 (view in UCSC) ,

LncBook: HSALNT0088013,

NONCODE: NONHSAT101515.2,

ENSG00000262211 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262211 Gene

No ASD Table

Relevant External Links for ENSG00000262211 Gene

GeneLoc Exon Structure for
ENSG00000262211

No data available for mRNA/cDNA for ENSG00000262211 Gene

Expression for ENSG00000262211 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000262211 Gene

genes like me logo Genes that share expression patterns with ENSG00000262211: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262211 Gene

Orthologs for ENSG00000262211 Gene

Evolution for ENSG00000262211 Gene

ENSEMBL:
Gene Tree for ENSG00000262211 (if available)
TreeFam:
Gene Tree for ENSG00000262211 (if available)

No data available for Orthologs for ENSG00000262211 Gene

Paralogs for ENSG00000262211 Gene

No data available for Paralogs for ENSG00000262211 Gene

Variants for ENSG00000262211 Gene

Variation tolerance for ENSG00000262211 Gene

Gene Damage Index Score: 0.54; 11.65% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000262211 Gene

Disorders for ENSG00000262211 Gene

No disorders were found for ENSG00000262211 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000262211 Gene

Publications for ENSG00000262211 Gene

No publications were found for ENSG00000262211 Gene.

No data available for Mastermind for ENSG00000262211 Gene

Products for ENSG00000262211 Gene

Sources for ENSG00000262211 Gene