Aliases for ENSG00000262039 Gene

Subcategory (RNA class) for ENSG00000262039 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000262039 Gene

  • Novel Transcript, Antisense To PHB 5
  • HSALNG0117177 169
  • NONHSAG022123 94
  • AC091180.5 5
  • Lnc-NGFR-3 170

External Ids for ENSG00000262039 Gene

Previous GeneCards Identifiers for ENSG00000262039 Gene

  • GC17P047448

Summaries for ENSG00000262039 Gene

GeneCards Summary for ENSG00000262039 Gene

ENSG00000262039 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000262039 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000262039 Gene

Genomics for ENSG00000262039 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000262039 Gene

Promoters and enhancers for ENSG00000262039 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J049370 Enhancer 0.6 ENCODE dbSUPER 750.6 +0.9 854 1.3 SP1 EGR1 DPF2 ZFHX2 POLR2A ENSG00000262039 ENSG00000186244 ENSG00000250186 PHB ZNF652 ENSG00000250948 LOC102724596
GH17J049371 Promoter/Enhancer 0.5 Ensembl dbSUPER 750.6 -0.1 -139 0.4 ENSG00000262039 ZNF652 LOC102724596
GH17J049387 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 +18.9 18875 4.5 ZBTB40 SMARCE1 POLR2A CTBP1 ZNF133 CC2D1A ETV6 ELF1 L3MBTL2 ZNF280D ZNF652 SPOP ENSG00000248714 PHB ENSG00000207127 ABI3 ENSG00000230532 SNF8 PHOSPHO1 UBE2Z
GH17J049413 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +44.3 44258 2.4 E2F8 SIN3A SP1 ZBTB40 SIX5 FOXA1 RBPJ POLR2A NR2F1 ATF1 ENSG00000207127 PHB lnc-NGFR-6 lnc-ZNF652-4 ENSG00000262837 FLJ45513 SAMD14 CALCOCO2 FAM117A UBE2Z
GH17J049365 Enhancer 0.7 Ensembl ENCODE 0.6 -4.9 -4868 1.1 CTCF MAFK CTBP1 SMARCA5 PKNOX1 SIN3A ZNF335 RAD21 RCOR1 FOXA1 ZNF652 ENSG00000262039 ENSG00000248714 LOC102724596
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000262039 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000262039 Gene

Genomic Locations for ENSG00000262039 Gene
chr17:49,370,740-49,476,988
(GRCh38/hg38)
Size:
106,249 bases
Orientation:
Plus strand
chr17:47,448,102-47,554,350
(GRCh37/hg19)
Size:
106,249 bases
Orientation:
Plus strand

Genomic View for ENSG00000262039 Gene

Genes around ENSG00000262039 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000262039 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000262039 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000262039 Gene

Proteins for ENSG00000262039 Gene

Post-translational modifications for ENSG00000262039 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000262039 Gene

Domains & Families for ENSG00000262039 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000262039 Gene

Function for ENSG00000262039 Gene

Phenotypes From GWAS Catalog for ENSG00000262039 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000262039 Gene

Localization for ENSG00000262039 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000262039 Gene

Pathways & Interactions for ENSG00000262039 Gene

PathCards logo

SuperPathways for ENSG00000262039 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000262039 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000262039 Gene

Drugs & Compounds for ENSG00000262039 Gene

No Compound Related Data Available

Transcripts for ENSG00000262039 Gene

mRNA/cDNA for ENSG00000262039 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(14) RNACentral transcripts :
(8) LncBook transcripts :
(13) LNCipedia transcripts :
(3) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000262039 Gene

No ASD Table

Relevant External Links for ENSG00000262039 Gene

GeneLoc Exon Structure for
ENSG00000262039

Expression for ENSG00000262039 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000262039 Gene

genes like me logo Genes that share expression patterns with ENSG00000262039: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000262039 Gene

Orthologs for ENSG00000262039 Gene

Evolution for ENSG00000262039 Gene

ENSEMBL:
Gene Tree for ENSG00000262039 (if available)
TreeFam:
Gene Tree for ENSG00000262039 (if available)

No data available for Orthologs for ENSG00000262039 Gene

Paralogs for ENSG00000262039 Gene

No data available for Paralogs for ENSG00000262039 Gene

Variants for ENSG00000262039 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000262039 Gene

Disorders for ENSG00000262039 Gene

No disorders were found for ENSG00000262039 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000262039 Gene

Publications for ENSG00000262039 Gene

No publications were found for ENSG00000262039 Gene.

No data available for External Links for ENSG00000262039 Gene

Products for ENSG00000262039 Gene

Sources for ENSG00000262039 Gene