Aliases for ENSG00000261810 Gene

Subcategory (RNA class) for ENSG00000261810 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000261810 Gene

  • Novel Transcript, Antisense To GRIN2A 5
  • NONHSAG018556 94
  • Lnc-ATF7IP2-2 170
  • AC133565.1 5

External Ids for ENSG00000261810 Gene

Previous GeneCards Identifiers for ENSG00000261810 Gene

  • GC16P010127

Summaries for ENSG00000261810 Gene

GeneCards Summary for ENSG00000261810 Gene

ENSG00000261810 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261810 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261810 Gene

Genomics for ENSG00000261810 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261810 Gene

Promoters and enhancers for ENSG00000261810 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J010743 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.4 +710.5 710483 3.9 E2F8 ZNF785 ZBTB40 LCORL RBPJ POLR2A USF2 NR2F6 ATF1 CREB1 TEKT5 HSALNG0109549 NUBP1 CIITA ENSG00000261810 ENSG00000256013 TVP23A GRIN2A piR-50838
GH16J010936 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 11.4 +908.7 908687 10.9 GTF3C2 ZNF785 SP1 ZBTB40 SIX5 ZBTB6 MLX RBPJ SMARCE1 POLR2A DEXI CLEC16A NONHSAG018594.2 piR-54282-003 ENSG00000261560 HNRNPCP4 ENSG00000263307 COX6CP1 PRM2 ENSG00000261216
GH16J010031 Enhancer 0.4 FANTOM5 24.1 -2.1 -2096 0.1 CTCF USF1 LOC105371076 lnc-EMP2-5 piR-38580-097 ENSG00000261810 GRIN2A
GH16J010120 Enhancer 0.8 Ensembl ENCODE dbSUPER 11.4 +88.3 88318 2.8 CTCF MAFK ZNF316 MAFG FOS ATF7 EMSY GRIN2A ENSG00000261810 piR-50241-003
GH16J010038 Promoter/Enhancer 0.8 ENCODE CraniofacialAtlas 10.8 +5.8 5811 1.2 RAD21 CTCF EBF1 KDM1A lnc-ATF7IP2-8 ENSG00000261810 GRIN2A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261810 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261810 Gene

Genomic Locations for ENSG00000261810 Gene
chr16:10,033,684-10,037,297
(GRCh38/hg38)
Size:
3,614 bases
Orientation:
Plus strand
chr16:10,127,541-10,131,154
(GRCh37/hg19)
Size:
3,614 bases
Orientation:
Plus strand

Genomic View for ENSG00000261810 Gene

Genes around ENSG00000261810 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261810 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261810 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261810 Gene

Proteins for ENSG00000261810 Gene

Post-translational modifications for ENSG00000261810 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261810 Gene

Domains & Families for ENSG00000261810 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261810 Gene

Function for ENSG00000261810 Gene

Phenotypes From GWAS Catalog for ENSG00000261810 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261810 Gene

Localization for ENSG00000261810 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261810 Gene

Pathways & Interactions for ENSG00000261810 Gene

PathCards logo

SuperPathways for ENSG00000261810 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261810 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261810 Gene

Drugs & Compounds for ENSG00000261810 Gene

No Compound Related Data Available

Transcripts for ENSG00000261810 Gene

mRNA/cDNA for ENSG00000261810 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261810 Gene

No ASD Table

Relevant External Links for ENSG00000261810 Gene

GeneLoc Exon Structure for
ENSG00000261810

Expression for ENSG00000261810 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261810 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261810 Gene

This gene is overexpressed in Testis (x22.7).
genes like me logo Genes that share expression patterns with ENSG00000261810: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261810 Gene

Orthologs for ENSG00000261810 Gene

Evolution for ENSG00000261810 Gene

ENSEMBL:
Gene Tree for ENSG00000261810 (if available)
TreeFam:
Gene Tree for ENSG00000261810 (if available)

No data available for Orthologs for ENSG00000261810 Gene

Paralogs for ENSG00000261810 Gene

No data available for Paralogs for ENSG00000261810 Gene

Variants for ENSG00000261810 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261810 Gene

Disorders for ENSG00000261810 Gene

No disorders were found for ENSG00000261810 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261810 Gene

Publications for ENSG00000261810 Gene

No publications were found for ENSG00000261810 Gene.

No data available for External Links for ENSG00000261810 Gene

Products for ENSG00000261810 Gene

Sources for ENSG00000261810 Gene