Aliases for ENSG00000261775 Gene

Subcategory (RNA class) for ENSG00000261775 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261775 Gene

  • Novel Transcript 5
  • NONHSAG017419.2 91
  • HSALNG0107194 164
  • Lnc-ARID3B-2 165
  • AC012435.3 5

External Ids for ENSG00000261775 Gene

Additional External Ids for ENSG00000261775 Gene

Previous GeneCards Identifiers for ENSG00000261775 Gene

  • GC15P074781

Summaries for ENSG00000261775 Gene

GeneCards Summary for ENSG00000261775 Gene

ENSG00000261775 is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for ENSG00000261775 Gene

  • Small nucleolar RNA SNORD77

Additional gene information for ENSG00000261775 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000261775 Gene

Genomics for ENSG00000261775 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261775 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J074489 Promoter/Enhancer 1.2 Ensembl ENCODE 0.7 +2.4 2402 1.1 CREB1 CTCF PRDM10 POLR2A JUND PHF21A PKNOX1 PATZ1 REST RAD21 ENSG00000212279 ENSG00000260103 lnc-UBL7-1 EDC3 SIN3A CLK3 MAN2C1 ARID3B SEMA7A ENSG00000261775
GH15J074497 Enhancer 0.8 Ensembl 0.4 +10.0 10047 1.3 ZNF629 PRDM1 PKNOX1 ZNF148 SP2 ZNF639 ZXDB ZBTB10 ZNF157 ZEB1 LOC102723714 CD276 MAN2C1 ENSG00000260274 SIN3A ENSG00000260103 UBL7 MPI SCAMP5 ENSG00000212279
GH15J074511 Enhancer 0.9 Ensembl ENCODE 0.3 +25.5 25505 4.6 SP1 FOXA1 IKZF2 YY1 EED DPF2 RUNX3 CBFB BCL11A HDGF ENSG00000212279 UBL7 UBL7-AS1 SCAMP5 ENSG00000260103 ARID3B LOC102723714 ENSG00000261775 MN297314
GH15J074482 Enhancer 0.4 Ensembl 0.7 -4.6 -4596 0.4 CTCF RAD21 ELF3 SMC3 UBL7 UBL7-AS1 SEMA7A ARID3B ENSG00000261775 piR-58297-180 ENSG00000260103 lnc-UBL7-1
GH15J074506 Enhancer 0.4 Ensembl 0.4 +18.8 18804 0.4 ZBTB20 ZNF121 HDGF LOC102723714 ENSG00000261775 MN297314 ARID3B UBL7 UBL7-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261775 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261775 Gene

Genomic Locations for ENSG00000261775 Gene
chr15:74,487,596-74,516,959
(GRCh38/hg38)
Size:
29,364 bases
Orientation:
Plus strand
chr15:74,781,943-74,809,300
(GRCh37/hg19)
Size:
27,358 bases
Orientation:
Plus strand

Genomic View for ENSG00000261775 Gene

Genes around ENSG00000261775 on UCSC Golden Path with GeneCards custom track
ENSG00000261775 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261775 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261775 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261775 Gene

Proteins for ENSG00000261775 Gene

Post-translational modifications for ENSG00000261775 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261775 Gene

Domains & Families for ENSG00000261775 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261775 Gene

Function for ENSG00000261775 Gene

Phenotypes From GWAS Catalog for ENSG00000261775 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261775 Gene

Localization for ENSG00000261775 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261775 Gene

Pathways & Interactions for ENSG00000261775 Gene

PathCards logo

SuperPathways for ENSG00000261775 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261775 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261775 Gene

Drugs & Compounds for ENSG00000261775 Gene

No Compound Related Data Available

Transcripts for ENSG00000261775 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261775 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000047DF73_9606 lncRNA 361 4

Ensembl: ENST00000562869 (view in UCSC) , ENST00000672338 (view in UCSC) ,

LncBook: HSALNT0222749,

LNCipedia: lnc-ARID3B-2:1,

NONCODE: NONHSAT047246.2,

URS00008B5BC7_9606 lncRNA 1398 3

LncBook: HSALNT0222747,

LNCipedia: lnc-ARID3B-2:2,

NONCODE: NONHSAT047245.2,

ENSG00000261775 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261775 Gene

No ASD Table

Relevant External Links for ENSG00000261775 Gene

GeneLoc Exon Structure for
ENSG00000261775

No data available for mRNA/cDNA for ENSG00000261775 Gene

Expression for ENSG00000261775 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261775 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261775 Gene

This gene is overexpressed in Testis (x7.7).
genes like me logo Genes that share expression patterns with ENSG00000261775: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261775 Gene

Orthologs for ENSG00000261775 Gene

Evolution for ENSG00000261775 Gene

ENSEMBL:
Gene Tree for ENSG00000261775 (if available)
TreeFam:
Gene Tree for ENSG00000261775 (if available)

No data available for Orthologs for ENSG00000261775 Gene

Paralogs for ENSG00000261775 Gene

No data available for Paralogs for ENSG00000261775 Gene

Variants for ENSG00000261775 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261775 Gene

Disorders for ENSG00000261775 Gene

No disorders were found for ENSG00000261775 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261775 Gene

Publications for ENSG00000261775 Gene

No publications were found for ENSG00000261775 Gene.

No data available for Mastermind for ENSG00000261775 Gene

Products for ENSG00000261775 Gene

Sources for ENSG00000261775 Gene