Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000261770 Gene

Subcategory (RNA class) for ENSG00000261770 Gene

lncRNA

Quality Score for this RNA gene is

13.2

Aliases for ENSG00000261770 Gene

  • AC006504.1 5

External Ids for ENSG00000261770 Gene

ORGUL Members for ENSG00000261770 Gene

Previous GeneCards Identifiers for ENSG00000261770 Gene

  • GC19M028248

Summaries for ENSG00000261770 Gene

GeneCards Summary for ENSG00000261770 Gene

ENSG00000261770 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for ENSG00000261770 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for ENSG00000261770

Additional gene information for ENSG00000261770 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000261770 Gene

Genomics for ENSG00000261770 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261770 Gene

Promoters and enhancers for ENSG00000261770 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J027757 Enhancer 0.2 dbSUPER 697.6 +1.4 1355 3.8 ENSG00000261770 LINC00662 GC19M027727
GH19J027791 Promoter/Enhancer 1.6 Ensembl ENCODE 67.9 -32.9 -32917 3.9 HDGF ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF213 ZNF416 ZNF207 ENSG00000267575 LINC00662 ENSG00000272635 LOC101927151 GC19M027792 ENSG00000261770 ENSG00000266977 ENSG00000267389 ENSG00000267768 LOC100419833
GH19J027779 Enhancer 0.8 FANTOM5 Ensembl ENCODE 25.4 -19.6 -19618 1.5 SPI1 ENSG00000261770 LINC00662 GC19M027792
GH19J027970 Enhancer 0.9 FANTOM5 ENCODE 17 -211.2 -211176 2.8 PKNOX1 ZBTB21 INSM2 KLF17 ZNF335 GATA3 ZNF366 PATZ1 FOS ZNF600 ENSG00000261770 ENSG00000267575 LINC00662 GC19P027968 LOC100419833 ENSG00000267623 ENSG00000272635
GH19J027774 Enhancer 0.6 FANTOM5 23.7 -13.9 -13884 1 CTCF ZNF777 ZNF610 ZNF16 NFE2 NFE2L2 ENSG00000261770 GC19M027792 LINC00662
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000261770 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261770 Gene

Genomic Locations for ENSG00000261770 Gene
chr19:27,757,184-27,760,849
(GRCh38/hg38)
Size:
3,666 bases
Orientation:
Minus strand
chr19:28,248,092-28,251,757
(GRCh37/hg19)
Size:
3,666 bases
Orientation:
Minus strand

Genomic View for ENSG00000261770 Gene

Genes around ENSG00000261770 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261770 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261770 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000261770 Gene

ORGUL Member Location for ENSG00000261770 gene

No data available for RefSeq DNA sequence for ENSG00000261770 Gene

Proteins for ENSG00000261770 Gene

Post-translational modifications for ENSG00000261770 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261770 Gene

Domains & Families for ENSG00000261770 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000261770 Gene

Function for ENSG00000261770 Gene

Phenotypes From GWAS Catalog for ENSG00000261770 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261770 Gene

Localization for ENSG00000261770 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261770 Gene

Pathways & Interactions for ENSG00000261770 Gene

SuperPathways for ENSG00000261770 Gene

No Data Available

Interacting Proteins for ENSG00000261770 Gene

Gene Ontology (GO) - Biological Process for ENSG00000261770 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261770 Gene

Drugs & Compounds for ENSG00000261770 Gene

No Compound Related Data Available

Transcripts for ENSG00000261770 Gene

fRNAdb Secondary structures for ENSG00000261770 Gene

  • FR337485

mRNA/cDNA for ENSG00000261770 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261770 Gene

No ASD Table

Relevant External Links for ENSG00000261770 Gene

GeneLoc Exon Structure for
ENSG00000261770

Expression for ENSG00000261770 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261770 Gene

genes like me logo Genes that share expression patterns with ENSG00000261770: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261770 Gene

Orthologs for ENSG00000261770 Gene

Evolution for ENSG00000261770 Gene

ENSEMBL:
Gene Tree for ENSG00000261770 (if available)
TreeFam:
Gene Tree for ENSG00000261770 (if available)

No data available for Orthologs for ENSG00000261770 Gene

Paralogs for ENSG00000261770 Gene

No data available for Paralogs for ENSG00000261770 Gene

Variants for ENSG00000261770 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261770 Gene

Disorders for ENSG00000261770 Gene

No disorders were found for ENSG00000261770 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261770 Gene

Publications for ENSG00000261770 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for ENSG00000261770 Gene

Sources for ENSG00000261770 Gene

Content
Loading form....