Aliases for ENSG00000261720 Gene

Subcategory (RNA class) for ENSG00000261720 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000261720 Gene

  • Novel Transcript 5
  • NONHSAG018228 92
  • HSALNG0108837 167
  • Lnc-SSTR5-1 168
  • AC009041.3 5

External Ids for ENSG00000261720 Gene

Previous GeneCards Identifiers for ENSG00000261720 Gene

  • GC16P001115

Summaries for ENSG00000261720 Gene

GeneCards Summary for ENSG00000261720 Gene

ENSG00000261720 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261720 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261720 Gene

Genomics for ENSG00000261720 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261720 Gene

Promoters and enhancers for ENSG00000261720 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J001054 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -10.3 -10269 0.7 CTCF GABPA REST SMC3 BCL11A NFIC RAD21 POLR2A ZFHX2 ZNF335 ENSG00000261720 piR-53162
GH16J001043 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -18.8 -18839 5.6 NRF1 GABPA ZNF341 SP2 ZBTB17 ZFP36 POLR2G POLR2A BCOR MNT WFIKKN1 ENSG00000261720 piR-53162
GH16J001035 Enhancer 1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -28.2 -28192 2.5 JUND ZIC2 FOS FOSL2 ZFHX2 EZH2 GLIS1 EGR2 ZBTB6 PATZ1 LMF1 SOX8 WFIKKN1 piR-53162 ENSG00000261720
GH16J001057 Enhancer 0.7 Ensembl 0.4 -7.6 -7607 0.4 CTCF ZBTB10 GABPA REST ZBTB7A SMC3 SRSF1 ZBTB17 RAD21 GABPB1 ENSG00000261720 piR-53162
GH16J001069 Enhancer 0.6 Ensembl 0.4 +5.2 5160 1.6 ZIC2 ZNF423 RFX1 ZNF341 KLF9 TAF15 HIC1 GLIS1 NFYC AGO1 SSTR5-AS1 HBQ1 SSTR5 ENSG00000261720
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261720 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261720 Gene

Genomic Locations for ENSG00000261720 Gene
chr16:1,065,240-1,066,502
(GRCh38/hg38)
Size:
1,263 bases
Orientation:
Plus strand
chr16:1,115,240-1,116,502
(GRCh37/hg19)
Size:
1,263 bases
Orientation:
Plus strand

Genomic View for ENSG00000261720 Gene

Genes around ENSG00000261720 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261720 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261720 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261720 Gene

Proteins for ENSG00000261720 Gene

Post-translational modifications for ENSG00000261720 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261720 Gene

Domains & Families for ENSG00000261720 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261720 Gene

Function for ENSG00000261720 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261720 Gene

Localization for ENSG00000261720 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261720 Gene

Pathways & Interactions for ENSG00000261720 Gene

PathCards logo

SuperPathways for ENSG00000261720 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000261720 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261720 Gene

Drugs & Compounds for ENSG00000261720 Gene

No Compound Related Data Available

Transcripts for ENSG00000261720 Gene

mRNA/cDNA for ENSG00000261720 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261720 Gene

No ASD Table

Relevant External Links for ENSG00000261720 Gene

GeneLoc Exon Structure for
ENSG00000261720

Expression for ENSG00000261720 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261720 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261720 Gene

This gene is overexpressed in Heart - Atrial Appendage (x14.6), Adrenal Gland (x12.1), and Heart - Left Ventricle (x8.9).
genes like me logo Genes that share expression patterns with ENSG00000261720: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261720 Gene

Orthologs for ENSG00000261720 Gene

Evolution for ENSG00000261720 Gene

ENSEMBL:
Gene Tree for ENSG00000261720 (if available)
TreeFam:
Gene Tree for ENSG00000261720 (if available)

No data available for Orthologs for ENSG00000261720 Gene

Paralogs for ENSG00000261720 Gene

No data available for Paralogs for ENSG00000261720 Gene

Variants for ENSG00000261720 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261720 Gene

Disorders for ENSG00000261720 Gene

No disorders were found for ENSG00000261720 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261720 Gene

Publications for ENSG00000261720 Gene

No publications were found for ENSG00000261720 Gene.

No data available for Mastermind for ENSG00000261720 Gene

Products for ENSG00000261720 Gene

Sources for ENSG00000261720 Gene