Aliases for ENSG00000261709 Gene

Subcategory (RNA class) for ENSG00000261709 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000261709 Gene

External Ids for ENSG00000261709 Gene

Previous GeneCards Identifiers for ENSG00000261709 Gene

  • GC15M045506

Summaries for ENSG00000261709 Gene

GeneCards Summary for ENSG00000261709 Gene

ENSG00000261709 is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for ENSG00000261709 Gene

  • Small nucleolar RNA SNORA11

Additional gene information for ENSG00000261709 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000261709 Gene

Genomics for ENSG00000261709 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261709 Gene

Promoters and enhancers for ENSG00000261709 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J045215 Enhancer 0.5 ENCODE 750.6 -0.8 -770 0.7 CBFA2T2 CTCF MTA3 TCF12 TAL1 ZBTB33 CBFA2T3 ENSG00000259338 ENSG00000279014 ENSG00000261709 lnc-SHF-1 lnc-SLC28A2-2 piR-51671-016
GH15J045205 Enhancer 0.7 ENCODE 0.4 +9.7 9725 0.2 CTCF MYC RAD21 ZNF24 IKZF1 REST TRIM22 ZNF143 LARP7 CTBP1 DUOX1 SLC28A2 DUOXA1 SPATA5L1 SHF ENSG00000261709
GH15J045206 Enhancer 0.6 Ensembl 0.4 +9.9 9932 0.2 CTCF MYC RAD21 IKZF1 TRIM22 ZNF143 LARP7 CTBP1 RUNX3 ZBTB17 SLC28A2 DUOX1 DUOXA1 SPATA5L1 SHF ENSG00000261709
GH15J045202 Enhancer 0.5 Ensembl 0.4 +11.7 11732 1.4 SP1 PKNOX1 JUND NR2F2 HNF4A ATF2 MAX RXRA SHF DUOX1 ENSG00000259539 SLC28A2 DUOXA1 SPATA5L1 ENSG00000259520 ENSG00000261709
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261709 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261709 Gene

Genomic Locations for ENSG00000261709 Gene
chr15:45,214,906-45,215,033
(GRCh38/hg38)
Size:
128 bases
Orientation:
Minus strand
chr15:45,506,646-45,507,242
(GRCh37/hg19)
Size:
597 bases
Orientation:
Minus strand

Genomic View for ENSG00000261709 Gene

Genes around ENSG00000261709 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261709 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261709 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261709 Gene

Proteins for ENSG00000261709 Gene

Post-translational modifications for ENSG00000261709 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261709 Gene

Domains & Families for ENSG00000261709 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261709 Gene

Function for ENSG00000261709 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261709 Gene

Localization for ENSG00000261709 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261709 Gene

Pathways & Interactions for ENSG00000261709 Gene

PathCards logo

SuperPathways for ENSG00000261709 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261709 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261709 Gene

Drugs & Compounds for ENSG00000261709 Gene

No Compound Related Data Available

Transcripts for ENSG00000261709 Gene

mRNA/cDNA for ENSG00000261709 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) Rfam transcripts :
(1) snOPY transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261709 Gene

No ASD Table

Relevant External Links for ENSG00000261709 Gene

GeneLoc Exon Structure for
ENSG00000261709

Expression for ENSG00000261709 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261709 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261709 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x5.4), Adrenal Gland (x5.1), and Brain - Caudate (basal ganglia) (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000261709: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261709 Gene

Orthologs for ENSG00000261709 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000261709 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA11 33
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA11 33
  • 83 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22676 33
  • 75 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia SNORA11 33
  • 71 (a)
ManyToMany
Species where no ortholog for ENSG00000261709 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000261709 Gene

ENSEMBL:
Gene Tree for ENSG00000261709 (if available)
TreeFam:
Gene Tree for ENSG00000261709 (if available)

Paralogs for ENSG00000261709 Gene

No data available for Paralogs for ENSG00000261709 Gene

Variants for ENSG00000261709 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261709 Gene

Disorders for ENSG00000261709 Gene

No disorders were found for ENSG00000261709 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261709 Gene

Publications for ENSG00000261709 Gene

No publications were found for ENSG00000261709 Gene.

No data available for External Links for ENSG00000261709 Gene

Products for ENSG00000261709 Gene

Sources for ENSG00000261709 Gene