Aliases for ENSG00000261707 Gene

Data sources for ENSG00000261707 Gene:

RNA type for ENSG00000261707 Gene

lncRNA

Aliases for ENSG00000261707 Gene

External Ids for ENSG00000261707 Gene

Summaries for ENSG00000261707 Gene

GeneCards Summary for ENSG00000261707 Gene

ENSG00000261707 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261707 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261707 Gene

Genomics for ENSG00000261707 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261707 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J077853 Enhancer 0.7 Ensembl ENCODE 250.7 +1.8 1820 2.5 SPI1 BHLHE40 ZNF768 CBX8 POLR2A FOS KDM1A ENSG00000261707 HSALNG0112846 VAT1L CLEC3A L13712-008
GH16J077856 Enhancer 0.3 Ensembl ENCODE 250.7 -1.0 -1032 1.4 ENSG00000261707 VAT1L HSALNG0112847 CLEC3A L13712-008
GH16J077211 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 14.2 +642.5 642494 2.9 SP1 MYC JUND NFIC POLR2A ZIC2 ZBTB10 SMAD5 ZNF639 ZNF341 lnc-ADAMTS18-12 SYCE1L MON1B VN2R10P ENSG00000261707 piR-55985-066 NONHSAG020037.2 ENSG00000261063 ADAMTS18
GH16J077721 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 8.6 +132.8 132790 3 ZNF207 MYC IKZF1 KLF9 CEBPA ATF3 POLR2A NFIC ZBTB10 YY1 NUDT7 ENSG00000261707 ENSG00000285538 VAT1L L13712-008
GH16J077899 Enhancer 1 Ensembl ENCODE 14.4 -41.4 -41414 2.2 ZNF580 ATF2 CEBPA NFIC CEBPB FEZF1 ZNF341 ZNF513 ZNF843 KLF16 SYCE1L VAT1L ENSG00000261707 PPIAP50 FJ601684-163 CLEC3A HSALNG0112848 L13712-008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261707 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261707 Gene

Latest Assembly
chr16:77,737,835-77,855,669
(GRCh38/hg38)
Size:
117,835 bases
Orientation:
Minus strand

Previous Assembly
chr16:77,775,365-77,776,897
(GRCh37/hg19 by Ensembl)
Size:
1,533 bases
Orientation:
Minus strand

Genomic View for ENSG00000261707 Gene

Genes around ENSG00000261707 on UCSC Golden Path with GeneCards custom track
ENSG00000261707 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261707 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261707 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261707 Gene

Proteins for ENSG00000261707 Gene

Post-translational modifications for ENSG00000261707 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261707 Gene

Domains & Families for ENSG00000261707 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261707 Gene

Function for ENSG00000261707 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261707 Gene

Localization for ENSG00000261707 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261707 Gene

Pathways & Interactions for ENSG00000261707 Gene

PathCards logo

SuperPathways for ENSG00000261707 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261707 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261707 Gene

Drugs & Compounds for ENSG00000261707 Gene

No Compound Related Data Available

Transcripts for ENSG00000261707 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261707 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000176A5E_9606 lncRNA 802 2

Ensembl: ENST00000563690 (view in UCSC) ,

LNCipedia: lnc-ADAMTS18-3:1,

URS00008BE232_9606 lncRNA 791 2

LNCipedia: lnc-ADAMTS18-3:2,

NONCODE: NONHSAT143809.2,

URS00008B4685_9606 lncRNA 634 2

LNCipedia: lnc-ADAMTS18-3:3,

NONCODE: NONHSAT143810.2,

URS0001BDAF94_9606 lncRNA 5807 1

LncBook: HSALNT0233810,

URS0001BD59A7_9606 lncRNA 5705 1

LncBook: HSALNT0233813,

ENSG00000261707 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261707 Gene

No ASD Table

Relevant External Links for ENSG00000261707 Gene

GeneLoc Exon Structure for
ENSG00000261707

No data available for mRNA/cDNA for ENSG00000261707 Gene

Expression for ENSG00000261707 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261707 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261707 Gene

This gene is overexpressed in Liver (x5.1).
genes like me logo Genes that share expression patterns with ENSG00000261707: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261707 Gene

Orthologs for ENSG00000261707 Gene

Evolution for ENSG00000261707 Gene

ENSEMBL:
Gene Tree for ENSG00000261707 (if available)
TreeFam:
Gene Tree for ENSG00000261707 (if available)

No data available for Orthologs for ENSG00000261707 Gene

Paralogs for ENSG00000261707 Gene

No data available for Paralogs for ENSG00000261707 Gene

Variants for ENSG00000261707 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261707 Gene

Disorders for ENSG00000261707 Gene

Additional Disease Information for ENSG00000261707

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000261707 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261707 Gene

Publications for ENSG00000261707 Gene

No publications were found for ENSG00000261707 Gene.

No data available for Mastermind for ENSG00000261707 Gene

Products for ENSG00000261707 Gene

Sources for ENSG00000261707 Gene