Aliases for ENSG00000261673 Gene

Subcategory (RNA class) for ENSG00000261673 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000261673 Gene

  • Novel Transcript 5
  • NONHSAG019916 94
  • HSALNG0112546 169
  • Lnc-PMFBP1-1 170
  • AC009075.1 5

External Ids for ENSG00000261673 Gene

Previous GeneCards Identifiers for ENSG00000261673 Gene

  • GC16M072258

Summaries for ENSG00000261673 Gene

GeneCards Summary for ENSG00000261673 Gene

ENSG00000261673 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261673 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261673 Gene

Genomics for ENSG00000261673 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261673 Gene

Promoters and enhancers for ENSG00000261673 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J072223 Promoter/Enhancer 1.5 EPDnew FANTOM5 Ensembl ENCODE 750.6 +0.7 663 1 LCORL RBPJ NR2F6 CREB1 HLF ZNF652 SP1 CEBPG PPARG ZNF644 PMFBP1 ENSG00000261673 DHODH HSALNG0112544
GH16J072225 Enhancer 0.2 Ensembl 750.6 -0.1 -57 0.4 ENSG00000261673 PMFBP1 ENSG00000260593 lnc-PMFBP1-5
GH16J071893 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 14.6 +329.4 329359 4 ZNF785 SIN3A ZBTB40 SP1 LCORL FOXA1 MLX RBPJ SMARCE1 POLR2A IST1 ZNF821 lnc-ZNF821-2 piR-32284 piR-51338 PHLPP2 HYDIN ZNF23 ENSG00000261673 ENSG00000260520
GH16J072923 Enhancer 1.5 FANTOM5 Ensembl ENCODE 14.6 -701.1 -701055 5.3 ZBTB6 LCORL MLX RBPJ TCF7L2 CTBP1 NR2F1 ATF1 NR2F6 ZNF217 DHX38 KRT18P18 LINC01568 ENSG00000261673 ENSG00000259817 ZFHX3 RF00017-2146 ENSG00000279757
GH16J071425 Promoter/Enhancer 1.4 Ensembl ENCODE 14.6 +798.6 798643 1.8 GTF3C2 ZNF785 SIN3A ZNF24 ZBTB40 ZBTB6 LCORL MLX RBPJ CTBP1 LINC02136 TRM-CAT2-1 ZNF23 DHX38 SF3B3 ZNF19 ATXN1L IST1 ENSG00000247324 PHLPP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261673 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261673 Gene

Genomic Locations for ENSG00000261673 Gene
chr16:72,224,565-72,225,144
(GRCh38/hg38)
Size:
580 bases
Orientation:
Minus strand
chr16:72,258,464-72,259,043
(GRCh37/hg19)
Size:
580 bases
Orientation:
Minus strand

Genomic View for ENSG00000261673 Gene

Genes around ENSG00000261673 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261673 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261673 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261673 Gene

Proteins for ENSG00000261673 Gene

Post-translational modifications for ENSG00000261673 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261673 Gene

Domains & Families for ENSG00000261673 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261673 Gene

Function for ENSG00000261673 Gene

Phenotypes From GWAS Catalog for ENSG00000261673 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261673 Gene

Localization for ENSG00000261673 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261673 Gene

Pathways & Interactions for ENSG00000261673 Gene

PathCards logo

SuperPathways for ENSG00000261673 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261673 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261673 Gene

Drugs & Compounds for ENSG00000261673 Gene

No Compound Related Data Available

Transcripts for ENSG00000261673 Gene

mRNA/cDNA for ENSG00000261673 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261673 Gene

No ASD Table

Relevant External Links for ENSG00000261673 Gene

GeneLoc Exon Structure for
ENSG00000261673

Expression for ENSG00000261673 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261673 Gene

genes like me logo Genes that share expression patterns with ENSG00000261673: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261673 Gene

Orthologs for ENSG00000261673 Gene

Evolution for ENSG00000261673 Gene

ENSEMBL:
Gene Tree for ENSG00000261673 (if available)
TreeFam:
Gene Tree for ENSG00000261673 (if available)

No data available for Orthologs for ENSG00000261673 Gene

Paralogs for ENSG00000261673 Gene

No data available for Paralogs for ENSG00000261673 Gene

Variants for ENSG00000261673 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261673 Gene

Disorders for ENSG00000261673 Gene

No disorders were found for ENSG00000261673 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261673 Gene

Publications for ENSG00000261673 Gene

No publications were found for ENSG00000261673 Gene.

No data available for External Links for ENSG00000261673 Gene

Products for ENSG00000261673 Gene

Sources for ENSG00000261673 Gene