Aliases for ENSG00000261646 Gene

Data sources for ENSG00000261646 Gene:

Subcategory (RNA class) for ENSG00000261646 Gene

lncRNA

Aliases for ENSG00000261646 Gene

External Ids for ENSG00000261646 Gene

Previous GeneCards Identifiers for ENSG00000261646 Gene

  • GC04M174388

Summaries for ENSG00000261646 Gene

GeneCards Summary for ENSG00000261646 Gene

ENSG00000261646 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261646 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261646 Gene

Genomics for ENSG00000261646 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261646 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J173468 Enhancer 0.2 Ensembl 250.7 +1.5 1540 0.2 ENSG00000261646 RNU6-1096P lnc-SAP30-16 LOC112267917 SCRG1 lnc-HAND2-2 SAP30
GH04J173469 Enhancer 0.2 Ensembl 250.7 +1.1 1140 0.2 ENSG00000261646 RNU6-1096P lnc-SAP30-16 LOC112267917 SCRG1 lnc-HAND2-2 SAP30
GH04J174120 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.8 -650.3 -650260 1 MNT IKZF1 HES1 CTCF BHLHE40 MCM3 REST NBN TRIM22 SMC3 LINC02268 CEP44 HMGB2 ENSG00000261646 HAND2-AS1 lnc-CEP44-2 LOC107986204 HSALNG0038627 FBXO8 lnc-CEP44-7
GH04J173249 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.4 +218.3 218259 4.1 BCL11A FEZF1 MNT HES1 MBD2 ZNF217 POLR2A BHLHE40 ZEB1 ZIC2 ENSG00000261646 lnc-HMGB2-2 lnc-HMGB2-8 GALNT7 HMGB2
GH04J174423 Promoter/Enhancer 1.2 Ensembl ENCODE 10.3 -953.5 -953498 1.1 IKZF1 BHLHE40 CEBPB ARNT ZNF395 VEZF1 NBN EP300 TAL1 TAF9B MIR4276 CEP44 FBXO8 ENSG00000261646 LINC02268 HSALNG0038644 lnc-HPGD-2 piR-48049-063 HPGD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261646 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261646 Gene

Latest Assembly
chr4:173,467,587-173,470,041
(GRCh38/hg38)
Size:
2,455 bases
Orientation:
Minus strand

Previous Assembly
chr4:174,388,984-174,391,192
(GRCh37/hg19 by Ensembl)
Size:
2,209 bases
Orientation:
Minus strand

Genomic View for ENSG00000261646 Gene

Genes around ENSG00000261646 on UCSC Golden Path with GeneCards custom track
ENSG00000261646 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261646 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261646 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261646 Gene

Proteins for ENSG00000261646 Gene

Post-translational modifications for ENSG00000261646 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261646 Gene

Domains & Families for ENSG00000261646 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261646 Gene

Function for ENSG00000261646 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261646 Gene

Localization for ENSG00000261646 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261646 Gene

Pathways & Interactions for ENSG00000261646 Gene

PathCards logo

SuperPathways for ENSG00000261646 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261646 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261646 Gene

Drugs & Compounds for ENSG00000261646 Gene

No Compound Related Data Available

Transcripts for ENSG00000261646 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261646 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003099C2_9606 lncRNA 2209 3

Ensembl: ENST00000563631 (view in UCSC) ,

LNCipedia: lnc-HAND2-1:1,

NONCODE: NONHSAT099252.2,

URS0001BCE220_9606 lncRNA 2209 1

LncBook: HSALNT0080897,

URS0001BDB619_9606 lncRNA 1758 1

LncBook: HSALNT0080896,

ENSG00000261646 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261646 Gene

No ASD Table

Relevant External Links for ENSG00000261646 Gene

GeneLoc Exon Structure for
ENSG00000261646

No data available for mRNA/cDNA for ENSG00000261646 Gene

Expression for ENSG00000261646 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261646 Gene

genes like me logo Genes that share expression patterns with ENSG00000261646: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261646 Gene

Orthologs for ENSG00000261646 Gene

Evolution for ENSG00000261646 Gene

ENSEMBL:
Gene Tree for ENSG00000261646 (if available)
TreeFam:
Gene Tree for ENSG00000261646 (if available)

No data available for Orthologs for ENSG00000261646 Gene

Paralogs for ENSG00000261646 Gene

No data available for Paralogs for ENSG00000261646 Gene

Variants for ENSG00000261646 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261646 Gene

Disorders for ENSG00000261646 Gene

No disorders were found for ENSG00000261646 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261646 Gene

Publications for ENSG00000261646 Gene

No publications were found for ENSG00000261646 Gene.

No data available for Mastermind for ENSG00000261646 Gene

Products for ENSG00000261646 Gene

Sources for ENSG00000261646 Gene