Aliases for ENSG00000261644 Gene

Subcategory (RNA class) for ENSG00000261644 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261644 Gene

  • Novel Transcript, Antisense To CYLD And NOD2 5
  • NONHSAG019428.2 91
  • NONHSAG019429.2 91
  • HSALNG0111361 164
  • Lnc-SNX20-1 165
  • AC007728.2 5

External Ids for ENSG00000261644 Gene

Previous GeneCards Identifiers for ENSG00000261644 Gene

  • GC16M050769

Summaries for ENSG00000261644 Gene

GeneCards Summary for ENSG00000261644 Gene

ENSG00000261644 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261644 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261644 Gene

Genomics for ENSG00000261644 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261644 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261644 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261644 Gene

Genomic Locations for ENSG00000261644 Gene
chr16:50,727,417-50,742,815
(GRCh38/hg38)
Size:
15,399 bases
Orientation:
Minus strand
chr16:50,769,624-50,774,627
(GRCh37/hg19)
Size:
5,004 bases
Orientation:
Minus strand

Genomic View for ENSG00000261644 Gene

Genes around ENSG00000261644 on UCSC Golden Path with GeneCards custom track
ENSG00000261644 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261644 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261644 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261644 Gene

Proteins for ENSG00000261644 Gene

Post-translational modifications for ENSG00000261644 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261644 Gene

Domains & Families for ENSG00000261644 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261644 Gene

Function for ENSG00000261644 Gene

Phenotypes From GWAS Catalog for ENSG00000261644 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261644 Gene

Localization for ENSG00000261644 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261644 Gene

Pathways & Interactions for ENSG00000261644 Gene

PathCards logo

SuperPathways for ENSG00000261644 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261644 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261644 Gene

Drugs & Compounds for ENSG00000261644 Gene

No Compound Related Data Available

Transcripts for ENSG00000261644 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261644 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A90D0C_9606 lncRNA 2296 3

Ensembl: ENST00000563315 (view in UCSC) ,

LncBook: HSALNT0230820,

LNCipedia: lnc-SNX20-1:4,

URS00003E6AFD_9606 lncRNA 1150 3

Ensembl: ENST00000567728 (view in UCSC) ,

LNCipedia: lnc-SNX20-1:1,

NONCODE: NONHSAT142435.2,

URS00008B978E_9606 lncRNA 896 3

LncBook: HSALNT0230829,

LNCipedia: lnc-SNX20-1:2,

NONCODE: NONHSAT142436.2,

URS0000D5B312_9606 lncRNA 6169 2

LncBook: HSALNT0230821,

LNCipedia: lnc-SNX20-1:6,

URS00001F23EA_9606 lncRNA 640 2

LNCipedia: lnc-SNX20-1:3,

NONCODE: NONHSAT142437.2,

ENSG00000261644 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261644 Gene

No ASD Table

Relevant External Links for ENSG00000261644 Gene

GeneLoc Exon Structure for
ENSG00000261644

No data available for mRNA/cDNA for ENSG00000261644 Gene

Expression for ENSG00000261644 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261644 Gene

This gene is overexpressed in Whole Blood (x10.3) and Spleen (x5.5).

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261644 Gene

Orthologs for ENSG00000261644 Gene

Evolution for ENSG00000261644 Gene

ENSEMBL:
Gene Tree for ENSG00000261644 (if available)
TreeFam:
Gene Tree for ENSG00000261644 (if available)

No data available for Orthologs for ENSG00000261644 Gene

Paralogs for ENSG00000261644 Gene

No data available for Paralogs for ENSG00000261644 Gene

Variants for ENSG00000261644 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261644 Gene

Disorders for ENSG00000261644 Gene

Additional Disease Information for ENSG00000261644

No disorders were found for ENSG00000261644 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261644 Gene

Publications for ENSG00000261644 Gene

No publications were found for ENSG00000261644 Gene.

No data available for Mastermind for ENSG00000261644 Gene

Products for ENSG00000261644 Gene

Sources for ENSG00000261644 Gene