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Aliases for ENSG00000261643 Gene

Subcategory (RNA class) for ENSG00000261643 Gene

lncRNA

Aliases for ENSG00000261643 Gene

  • AL590235.1 5

External Ids for ENSG00000261643 Gene

ORGUL Members for ENSG00000261643 Gene

Summaries for ENSG00000261643 Gene

GeneCards Summary for ENSG00000261643 Gene

ENSG00000261643 is an Uncategorized gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261643 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000261643 Gene

Genomics for ENSG00000261643 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261643 Gene

Promoters and enhancers for ENSG00000261643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I003480 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +20.5 20493 7.7 HDGF CLOCK ARID4B NEUROD1 SIN3A ZBTB7B GLIS2 ELK1 ZNF143 REST LRPAP1 MFSD10 ZBTB49 ENSG00000261643 LINC00955 FAM193A NOP14 DOK7 HTT-AS MSANTD1
GH04I003491 Enhancer 0.8 ENCODE dbSUPER 16 +9.8 9761 6.8 KLF17 ZIC2 ZFHX2 GLIS2 POLR2A GLIS1 ZNF24 ZNF600 KLF8 EGR2 LRPAP1 ENSG00000261643 ZBTB49 FAM193A MFSD10 DOK7 NOP14-AS1 GC04P003490
GH04I003531 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 6.5 -27.8 -27814 1.7 ARID4B SIN3A DMAP1 ZNF48 YY1 ETS1 POLR2B GLIS2 ZNF143 SP3 LRPAP1 FAM86EP ENSG00000261643 PIR35299
GH04I003460 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 5.3 +41.7 41746 4.1 PKNOX1 NFIB ZFP64 ARID4B NEUROD1 SIN3A RFX5 RCOR1 HCFC1 RXRA DOK7 GC04P003463 ENSG00000261643 ZBTB49 HTT LOC105374354
GH04I003500 Enhancer 0.4 dbSUPER 16.3 +2.3 2259 3.8 POLR2A ZNF133 LRPAP1 ENSG00000261643 GC04P003490 DOK7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000261643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261643 Gene

Genomic Locations for ENSG00000261643 Gene
chr4:3,503,597-3,504,457
(GRCh38/hg38)
Size:
861 bases
Orientation:
Minus strand
chr4:3,505,324-3,506,184
(GRCh37/hg19)

Genomic View for ENSG00000261643 Gene

Genes around ENSG00000261643 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261643 Gene

Proteins for ENSG00000261643 Gene

Post-translational modifications for ENSG00000261643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261643 Gene

Domains & Families for ENSG00000261643 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000261643 Gene

Function for ENSG00000261643 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261643 Gene

Localization for ENSG00000261643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261643 Gene

Pathways & Interactions for ENSG00000261643 Gene

SuperPathways for ENSG00000261643 Gene

No Data Available

Interacting Proteins for ENSG00000261643 Gene

Gene Ontology (GO) - Biological Process for ENSG00000261643 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261643 Gene

Drugs & Compounds for ENSG00000261643 Gene

No Compound Related Data Available

Transcripts for ENSG00000261643 Gene

mRNA/cDNA for ENSG00000261643 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261643 Gene

No ASD Table

Relevant External Links for ENSG00000261643 Gene

GeneLoc Exon Structure for
ENSG00000261643

Expression for ENSG00000261643 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261643 Gene

genes like me logo Genes that share expression patterns with ENSG00000261643: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261643 Gene

Orthologs for ENSG00000261643 Gene

Evolution for ENSG00000261643 Gene

ENSEMBL:
Gene Tree for ENSG00000261643 (if available)
TreeFam:
Gene Tree for ENSG00000261643 (if available)

No data available for Orthologs for ENSG00000261643 Gene

Paralogs for ENSG00000261643 Gene

No data available for Paralogs for ENSG00000261643 Gene

Variants for ENSG00000261643 Gene

Variation tolerance for ENSG00000261643 Gene

Gene Damage Index Score: 1.85; 34.66% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000261643 Gene

Disorders for ENSG00000261643 Gene

No disorders were found for ENSG00000261643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261643 Gene

Publications for ENSG00000261643 Gene

No publications were found for ENSG00000261643 Gene.

Products for ENSG00000261643 Gene

Sources for ENSG00000261643 Gene

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