Aliases for ENSG00000261630 Gene

Subcategory (RNA class) for ENSG00000261630 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000261630 Gene

  • Novel Transcript, Antisense To FTO 5
  • Lnc-RPGRIP1L-4 168
  • HSALNG0111538 167
  • NONHSAG019487 92
  • AC007496.2 5

External Ids for ENSG00000261630 Gene

Summaries for ENSG00000261630 Gene

GeneCards Summary for ENSG00000261630 Gene

ENSG00000261630 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261630 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261630 Gene

Genomics for ENSG00000261630 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261630 Gene

Promoters and enhancers for ENSG00000261630 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J053982 Enhancer 0.7 Ensembl dbSUPER 500.7 -1.0 -989 1 NR2F2 JUND RXRA NR2F6 HNF4A REST NFIA RAD21 SP1 YY1 ENSG00000261630 ENSG00000280392 lnc-RBL2-6 FTO
GH16J053978 Enhancer 0.4 Ensembl dbSUPER 500.7 +1.8 1811 0.2 HMBOX1 ENSG00000261630 lnc-RBL2-6 FTO
GH16J053960 Enhancer 1.2 VISTA Ensembl dbSUPER 0.4 +20.8 20823 1.9 EP300 ZNF10 TRIM28 ZNF341 OSR2 ZNF266 ZBTB17 GATA3 ZNF610 IKZF3 RBL2 ENSG00000261056 CHD9 lnc-RBL2-6 ENSG00000261630 FTO
GH16J053952 Enhancer 1.1 VISTA ENCODE dbSUPER 0.3 +28.6 28577 1.9 IRF1 PBX2 IRF2 GATA3 RAD21 MAX MEIS2 STAT2 MYC FOS lnc-RBL2-6 ENSG00000261630 FTO
GH16J053988 Enhancer 0.4 Ensembl CraniofacialAtlas 0.7 -4.5 -4489 0.8 MAFK ENSG00000261630 ENSG00000280392 lnc-RBL2-6 FTO
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261630 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261630 Gene

Genomic Locations for ENSG00000261630 Gene
chr16:53,981,229-53,981,912
(GRCh38/hg38)
Size:
684 bases
Orientation:
Minus strand
chr16:54,015,141-54,015,824
(GRCh37/hg19)
Size:
684 bases
Orientation:
Minus strand

Genomic View for ENSG00000261630 Gene

Genes around ENSG00000261630 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261630 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261630 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261630 Gene

Proteins for ENSG00000261630 Gene

Post-translational modifications for ENSG00000261630 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261630 Gene

Domains & Families for ENSG00000261630 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261630 Gene

Function for ENSG00000261630 Gene

Phenotypes From GWAS Catalog for ENSG00000261630 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261630 Gene

Localization for ENSG00000261630 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261630 Gene

Pathways & Interactions for ENSG00000261630 Gene

PathCards logo

SuperPathways for ENSG00000261630 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000261630 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261630 Gene

Drugs & Compounds for ENSG00000261630 Gene

No Compound Related Data Available

Transcripts for ENSG00000261630 Gene

mRNA/cDNA for ENSG00000261630 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261630 Gene

No ASD Table

Relevant External Links for ENSG00000261630 Gene

GeneLoc Exon Structure for
ENSG00000261630

Expression for ENSG00000261630 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261630 Gene

genes like me logo Genes that share expression patterns with ENSG00000261630: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261630 Gene

Orthologs for ENSG00000261630 Gene

Evolution for ENSG00000261630 Gene

ENSEMBL:
Gene Tree for ENSG00000261630 (if available)
TreeFam:
Gene Tree for ENSG00000261630 (if available)

No data available for Orthologs for ENSG00000261630 Gene

Paralogs for ENSG00000261630 Gene

No data available for Paralogs for ENSG00000261630 Gene

Variants for ENSG00000261630 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261630 Gene

Disorders for ENSG00000261630 Gene

No disorders were found for ENSG00000261630 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261630 Gene

Publications for ENSG00000261630 Gene

No publications were found for ENSG00000261630 Gene.

No data available for Mastermind for ENSG00000261630 Gene

Products for ENSG00000261630 Gene

Sources for ENSG00000261630 Gene