Aliases for ENSG00000261613 Gene

Subcategory (RNA class) for ENSG00000261613 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000261613 Gene

  • Novel Transcript, Antisense To PDPK1 5
  • HSALNG0109027 169
  • NONHSAG018340 94
  • Lnc-CEMP1-1 170
  • AC093525.6 5

External Ids for ENSG00000261613 Gene

Previous GeneCards Identifiers for ENSG00000261613 Gene

  • GC16M002610

Summaries for ENSG00000261613 Gene

GeneCards Summary for ENSG00000261613 Gene

ENSG00000261613 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261613 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261613 Gene

Genomics for ENSG00000261613 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261613 Gene

Promoters and enhancers for ENSG00000261613 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J002556 Enhancer 0.2 dbSUPER 767.9 -1.7 -1670 3 ENSG00000261613 piR-58609-001 PDPK1
GH16J002679 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 45.2 -126.2 -126191 5.5 ZNF785 SIN3A ZNF24 SP1 ZBTB40 SIX5 ZBTB6 MLX SMARCE1 RBPJ ERVK13-1 KCTD5 ENSG00000279901 piR-32815-002 piR-39119-002 piR-38180-002 piR-45298-002 ABCA3 TBL3 ZNF597
GH16J002672 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 51.3 -117.5 -117535 3.2 ZBTB40 POLR2A ZNF362 NFYC ELF1 ZNF148 NKRF ELF3 ZFX SP1 lnc-KCTD5-2 ENSG00000261613 ERVK13-1 ENSG00000269937 PRSS27 KCTD5 SRRM2-AS1 ABCA17P ABCA3 piR-35339-002
GH16J002662 Enhancer 1.1 ENCODE dbSUPER 56.1 -108.0 -108044 2.2 ZBTB6 CTBP1 ZNF362 CC2D1A L3MBTL2 ZNF121 BCL6B ZNF384 MAFK SP7 ENSG00000261613 ERVK13-1 ZNF75A TIGD7 NME3 ZNF213-AS1 CLUAP1 ZSCAN32 ZNF174 FLYWCH2
GH16J002686 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 25.8 -131.1 -131121 2 SP1 ETV6 NKRF MLLT1 POLR2A RELA IKZF1 TRIM22 IKZF2 EED ENSG00000261613 KCTD5 ERVK13-1 lnc-PRSS27-2 piR-34517-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261613 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261613 Gene

Genomic Locations for ENSG00000261613 Gene
chr16:2,554,060-2,556,060
(GRCh38/hg38)
Size:
2,001 bases
Orientation:
Minus strand

Genomic View for ENSG00000261613 Gene

Genes around ENSG00000261613 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261613 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261613 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261613 Gene

Proteins for ENSG00000261613 Gene

Post-translational modifications for ENSG00000261613 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261613 Gene

Domains & Families for ENSG00000261613 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261613 Gene

Function for ENSG00000261613 Gene

Phenotypes From GWAS Catalog for ENSG00000261613 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261613 Gene

Localization for ENSG00000261613 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261613 Gene

Pathways & Interactions for ENSG00000261613 Gene

PathCards logo

SuperPathways for ENSG00000261613 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261613 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261613 Gene

Drugs & Compounds for ENSG00000261613 Gene

No Compound Related Data Available

Transcripts for ENSG00000261613 Gene

mRNA/cDNA for ENSG00000261613 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(4) LNCipedia transcripts :
(3) NONCODE transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261613 Gene

No ASD Table

Relevant External Links for ENSG00000261613 Gene

GeneLoc Exon Structure for
ENSG00000261613

Expression for ENSG00000261613 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261613 Gene

Orthologs for ENSG00000261613 Gene

Evolution for ENSG00000261613 Gene

ENSEMBL:
Gene Tree for ENSG00000261613 (if available)
TreeFam:
Gene Tree for ENSG00000261613 (if available)

No data available for Orthologs for ENSG00000261613 Gene

Paralogs for ENSG00000261613 Gene

No data available for Paralogs for ENSG00000261613 Gene

Variants for ENSG00000261613 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261613 Gene

Disorders for ENSG00000261613 Gene

No disorders were found for ENSG00000261613 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261613 Gene

Publications for ENSG00000261613 Gene

No publications were found for ENSG00000261613 Gene.

No data available for External Links for ENSG00000261613 Gene

Products for ENSG00000261613 Gene

Sources for ENSG00000261613 Gene