Aliases for ENSG00000261611 Gene

Aliases for ENSG00000261611 Gene

  • KRAB Domain-Containing Protein 13
  • Novel Transcript 5
  • AC010547.4 5

External Ids for ENSG00000261611 Gene

Previous GeneCards Identifiers for ENSG00000261611 Gene

  • GC16M071482
  • GC16M071485
  • GC16M071488
  • GC16M071491
  • GC16M071451
  • GC16M071473
  • GC16M071475
  • GC16M071471
  • GC16M071454
  • GC16M071456
  • GC16M071458
  • GC16M071460
  • GC16M071462
  • GC16M071466

Summaries for ENSG00000261611 Gene

GeneCards Summary for ENSG00000261611 Gene

ENSG00000261611 is a Protein Coding gene. An important paralog of this gene is ZNF19.

Additional gene information for ENSG00000261611 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261611 Gene

Genomics for ENSG00000261611 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261611 Gene

Promoters and enhancers for ENSG00000261611 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J071489 Promoter 0.5 EPDnew 500.7 0.0 -33 0.1 GABPB1 ZBTB33 ENSG00000261611 ZNF19 TAT-AS1 piR-48222-149 lnc-TAT-6
GH16J071483 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +4.9 4853 1.9 ZBTB40 ZNF217 EP300 TCF12 POLR2G SP1 PHF8 POLR2A ZBTB10 CLOCK ZNF23 lnc-ZNF23-5 ZNF19 ENSG00000247324 PHLPP2 HPR TXNL4B ENSG00000261611 lnc-TAT-6
GH16J071492 Enhancer 1 Ensembl ENCODE 0.7 -3.0 -2990 5.8 CTCF ZBTB11 MYC RBM25 HDAC3 NCOR1 ZNF316 NFIC MAFF TRIM24 ZNF23 ZNF19 ENSG00000247324 TAT SF3B3 CALB2 VAC14 DHX38 TAT-AS1 PHLPP2
GH16J071459 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +27.8 27812 3.4 EP300 HNRNPK ZBTB40 ZNF217 CTCF SIN3A NRF1 TCF12 POLR2G GTF2E2 ZNF23 ENSG00000247324 lnc-ZNF19-2 DHX38 SF3B3 IST1 ATXN1L PHLPP2 MARVELD3 TXNL4B
GH16J071499 Enhancer 0.7 ENCODE 0.4 -10.6 -10642 0.2 RXRA CTCF REST CUX1 ZBTB25 RAD21 TRIM22 SMC3 MAFF MAFK ZNF23 ENSG00000247324 CALB2 ENSG00000261611 piR-48222-149 lnc-TAT-6 ZNF19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261611 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261611 Gene

Genomic Locations for ENSG00000261611 Gene
chr16:71,447,600-71,489,311
(GRCh38/hg38)
Size:
41,712 bases
Orientation:
Minus strand
chr16:71,481,503-71,523,214
(GRCh37/hg19)
Size:
41,712 bases
Orientation:
Minus strand

Genomic View for ENSG00000261611 Gene

Genes around ENSG00000261611 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261611 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261611 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261611 Gene

Proteins for ENSG00000261611 Gene

  • Protein details for ENSG00000261611 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A3B3IT38-A0A3B3IT38_HUMAN
    Recommended name:
    KRAB domain-containing protein
    Protein Accession:
    A0A3B3IT38

    Protein attributes for ENSG00000261611 Gene

    Size:
    82 amino acids
    Molecular mass:
    9120 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000261611 Gene

Post-translational modifications for ENSG00000261611 Gene

No Post-translational modifications

Other Protein References for ENSG00000261611 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000261611 Gene

Domains & Families for ENSG00000261611 Gene

Protein Domains for ENSG00000261611 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ENSG00000261611: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261611 Gene

Function for ENSG00000261611 Gene

Phenotypes From GWAS Catalog for ENSG00000261611 Gene

Gene Ontology (GO) - Molecular Function for ENSG00000261611 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003700 DNA-binding transcription factor activity IBA --
GO:0043565 sequence-specific DNA binding IBA --
genes like me logo Genes that share ontologies with ENSG00000261611: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261611 Gene

Localization for ENSG00000261611 Gene

Gene Ontology (GO) - Cellular Components for ENSG00000261611 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
genes like me logo Genes that share ontologies with ENSG00000261611: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ENSG00000261611 Gene

Pathways & Interactions for ENSG00000261611 Gene

PathCards logo

SuperPathways for ENSG00000261611 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000261611 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ENSG00000261611: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261611 Gene

Drugs & Compounds for ENSG00000261611 Gene

No Compound Related Data Available

Transcripts for ENSG00000261611 Gene

mRNA/cDNA for ENSG00000261611 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261611 Gene

No ASD Table

Relevant External Links for ENSG00000261611 Gene

GeneLoc Exon Structure for
ENSG00000261611

Expression for ENSG00000261611 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261611 Gene

This gene is overexpressed in Pituitary (x4.7).

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261611 Gene

Orthologs for ENSG00000261611 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000261611 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 31
  • 20 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 31
OneToMany
Species where no ortholog for ENSG00000261611 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000261611 Gene

ENSEMBL:
Gene Tree for ENSG00000261611 (if available)
TreeFam:
Gene Tree for ENSG00000261611 (if available)

Paralogs for ENSG00000261611 Gene

Variants for ENSG00000261611 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261611 Gene

Disorders for ENSG00000261611 Gene

No disorders were found for ENSG00000261611 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261611 Gene

Publications for ENSG00000261611 Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 13 54

No data available for Mastermind for ENSG00000261611 Gene

Products for ENSG00000261611 Gene

Sources for ENSG00000261611 Gene