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Aliases for ENSG00000261560 Gene

Subcategory (RNA class) for ENSG00000261560 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000261560 Gene

  • AC007216.3 5

External Ids for ENSG00000261560 Gene

ORGUL Members for ENSG00000261560 Gene

Previous GeneCards Identifiers for ENSG00000261560 Gene

  • GC16M011974

Summaries for ENSG00000261560 Gene

GeneCards Summary for ENSG00000261560 Gene

ENSG00000261560 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261560 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000261560 Gene

Genomics for ENSG00000261560 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261560 Gene

Promoters and enhancers for ENSG00000261560 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I012799 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 65.6 -919.5 -919457 5 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 CPPED1 ENSG00000261560 LOC105371084 COX6CP1 NPIPB2 ENSG00000261216 SNX29 LOC105371089
GH16I012061 Enhancer 1.3 Ensembl ENCODE dbSUPER 107.8 -180.2 -180197 2.5 ZNF493 ZFP64 BRCA1 ZNF213 ZNF143 KLF7 FOS ZNF202 ZC3H11A REST LOC105371084 ENSG00000261560 HNRNPCP4 ZC3H7A NPIPB2 COX6CP1 ENSG00000261216 SOCS1 TXNDC11 RSL1D1
GH16I011639 Enhancer 2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 45.5 +241.9 241911 3.3 PKNOX1 FOXA2 ARID4B NEUROD1 SIN3A YBX1 DMAP1 ZNF2 YY1 SLC30A9 LOC105371084 HNRNPCP4 ENSG00000261560 LITAF COX6CP1 ZC3H7A ENSG00000261216 TXNDC11 NPIPB2 SOCS1
GH16I011344 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 21.4 +537.2 537196 1.8 PKNOX1 CLOCK FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 RMI2 LOC105371083 LOC105371084 ENSG00000261560 GSPT1 ZC3H7A SOCS1 HNRNPCP4 RSL1D1 PRM2
GH16I011251 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 18.2 +627.9 627940 6.8 HDGF SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B POLR2B SOCS1 RMI2 ENSG00000261560 RSL1D1 LOC105371084 GSPT1 HNRNPCP4 ZC3H7A LOC105371083 LOC105371082
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000261560 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261560 Gene

Genomic Locations for ENSG00000261560 Gene
chr16:11,881,075-11,882,569
(GRCh38/hg38)
Size:
1,495 bases
Orientation:
Minus strand
chr16:11,974,932-11,976,426
(GRCh37/hg19)

Genomic View for ENSG00000261560 Gene

Genes around ENSG00000261560 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261560 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261560 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261560 Gene

Proteins for ENSG00000261560 Gene

Post-translational modifications for ENSG00000261560 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261560 Gene

Domains & Families for ENSG00000261560 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000261560 Gene

Function for ENSG00000261560 Gene

Phenotypes From GWAS Catalog for ENSG00000261560 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261560 Gene

Localization for ENSG00000261560 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261560 Gene

Pathways & Interactions for ENSG00000261560 Gene

SuperPathways for ENSG00000261560 Gene

No Data Available

Interacting Proteins for ENSG00000261560 Gene

Gene Ontology (GO) - Biological Process for ENSG00000261560 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261560 Gene

Drugs & Compounds for ENSG00000261560 Gene

No Compound Related Data Available

Transcripts for ENSG00000261560 Gene

mRNA/cDNA for ENSG00000261560 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261560 Gene

No ASD Table

Relevant External Links for ENSG00000261560 Gene

GeneLoc Exon Structure for
ENSG00000261560

Expression for ENSG00000261560 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261560 Gene

genes like me logo Genes that share expression patterns with ENSG00000261560: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261560 Gene

Orthologs for ENSG00000261560 Gene

Evolution for ENSG00000261560 Gene

ENSEMBL:
Gene Tree for ENSG00000261560 (if available)
TreeFam:
Gene Tree for ENSG00000261560 (if available)

No data available for Orthologs for ENSG00000261560 Gene

Paralogs for ENSG00000261560 Gene

No data available for Paralogs for ENSG00000261560 Gene

Variants for ENSG00000261560 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261560 Gene

Disorders for ENSG00000261560 Gene

No disorders were found for ENSG00000261560 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261560 Gene

Publications for ENSG00000261560 Gene

No publications were found for ENSG00000261560 Gene.

Products for ENSG00000261560 Gene

Sources for ENSG00000261560 Gene

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