Aliases for ENSG00000261544 Gene

Subcategory (RNA class) for ENSG00000261544 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261544 Gene

  • Novel Transcript, Intronic To DENND4A 5
  • NONHSAG017207.2 91
  • HSALNG0106667 164
  • Lnc-MEGF11-2 165
  • AC011939.2 5

External Ids for ENSG00000261544 Gene

Previous GeneCards Identifiers for ENSG00000261544 Gene

  • GC15M066058

Summaries for ENSG00000261544 Gene

GeneCards Summary for ENSG00000261544 Gene

ENSG00000261544 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261544 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261544 Gene

Genomics for ENSG00000261544 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261544 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J065766 Enhancer 0.8 ENCODE 600.7 +0.3 297 0.9 ZNF629 ZNF692 JUND FOXA1 ZNF501 ZNF600 ZNF148 ATF7 SCRT2 MNT ENSG00000261544 PDCD7 DENND4A ENSG00000260773 SLC24A1 piR-40163-036 RAB11A
GH15J065767 Enhancer 0.5 ENCODE 600.7 -0.7 -660 0.2 ZNF600 RUNX3 ATF4 POLR2A SPI1 ENSG00000261544 DENND4A SLC24A1 ENSG00000259924 RAB11A
GH15J065761 Enhancer 0.8 ENCODE dbSUPER 0.4 +5.7 5708 1.4 IKZF2 RCOR1 ARID3A RELB RUNX3 NBN BMI1 JUNB CHD1 BATF DENND4A INTS14 ENSG00000261544 piR-40163-036 RAB11A
GH15J065755 Enhancer 0.8 dbSUPER 0.4 +10.7 10738 2.6 IKZF1 ZNF501 HDAC1 SOX6 EP300 ZBTB44 ZXDB HES1 TSHZ1 ZNF316 DENND4A SLC24A1 ENSG00000261544 piR-40163-036 RAB11A
GH15J065762 Enhancer 0.4 dbSUPER 0.7 +4.0 4003 0.8 PRDM10 ZNF362 SP7 DENND4A ENSG00000261544 piR-40163-036 RAB11A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261544 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261544 Gene

Genomic Locations for ENSG00000261544 Gene
chr15:65,766,460-65,767,398
(GRCh38/hg38)
Size:
939 bases
Orientation:
Minus strand
chr15:66,058,798-66,059,736
(GRCh37/hg19)
Size:
939 bases
Orientation:
Minus strand

Genomic View for ENSG00000261544 Gene

Genes around ENSG00000261544 on UCSC Golden Path with GeneCards custom track
ENSG00000261544 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261544 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261544 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261544 Gene

Proteins for ENSG00000261544 Gene

Post-translational modifications for ENSG00000261544 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261544 Gene

Domains & Families for ENSG00000261544 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261544 Gene

Function for ENSG00000261544 Gene

Phenotypes From GWAS Catalog for ENSG00000261544 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261544 Gene

Localization for ENSG00000261544 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261544 Gene

Pathways & Interactions for ENSG00000261544 Gene

PathCards logo

SuperPathways for ENSG00000261544 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261544 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261544 Gene

Drugs & Compounds for ENSG00000261544 Gene

No Compound Related Data Available

Transcripts for ENSG00000261544 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261544 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001FC58F_9606 lncRNA 428 4

Ensembl: ENST00000567396 (view in UCSC) ,

LncBook: HSALNT0221597,

LNCipedia: lnc-MEGF11-2:1,

NONCODE: NONHSAT046762.2,

ENSG00000261544 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261544 Gene

No ASD Table

Relevant External Links for ENSG00000261544 Gene

GeneLoc Exon Structure for
ENSG00000261544

No data available for mRNA/cDNA for ENSG00000261544 Gene

Expression for ENSG00000261544 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261544 Gene

genes like me logo Genes that share expression patterns with ENSG00000261544: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261544 Gene

Orthologs for ENSG00000261544 Gene

Evolution for ENSG00000261544 Gene

ENSEMBL:
Gene Tree for ENSG00000261544 (if available)
TreeFam:
Gene Tree for ENSG00000261544 (if available)

No data available for Orthologs for ENSG00000261544 Gene

Paralogs for ENSG00000261544 Gene

No data available for Paralogs for ENSG00000261544 Gene

Variants for ENSG00000261544 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261544 Gene

Disorders for ENSG00000261544 Gene

Additional Disease Information for ENSG00000261544

No disorders were found for ENSG00000261544 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261544 Gene

Publications for ENSG00000261544 Gene

No publications were found for ENSG00000261544 Gene.

No data available for Mastermind for ENSG00000261544 Gene

Products for ENSG00000261544 Gene

Sources for ENSG00000261544 Gene