Aliases for ENSG00000261467 Gene

Subcategory (RNA class) for ENSG00000261467 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261467 Gene

  • Novel Transcript 5
  • NONHSAG047950.2 91
  • HSALNG0058883 164
  • AC099398.1 5
  • Lnc-ELN-3 165

External Ids for ENSG00000261467 Gene

Previous GeneCards Identifiers for ENSG00000261467 Gene

  • GC07P073400

Summaries for ENSG00000261467 Gene

GeneCards Summary for ENSG00000261467 Gene

ENSG00000261467 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261467 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261467 Gene

Genomics for ENSG00000261467 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261467 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J073984 Enhancer 0.5 Ensembl dbSUPER 600.7 +0.2 209 1.2 CTCF IKZF1 ENSG00000261467 lnc-ELN-4 ELN TMEM270 RF00017-6321
GH07J074026 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.2 +43.0 43004 5.4 CTCF TEAD4 ZNF512 JUND ZNF143 ZIC2 ZSCAN4 REST RAD21 TRIM22 ELN NONHSAG047951.2 ENSG00000261467 METTL27 CLIP2 lnc-RFC2-5 LIMK1 RF00017-6328
GH07J073989 Enhancer 0.5 dbSUPER 13.4 +4.4 4406 1.6 ATF7 CREB1 ZNF189 ATF3 ATF2 JUN ENSG00000261467 LIMK1 lnc-ELN-4 ELN TMEM270 RF00017-6321
GH07J073978 Enhancer 1 ENCODE dbSUPER 0.4 -6.9 -6933 1.5 CREB1 GATAD2A CTCF TEAD4 TFE3 ZNF143 PKNOX1 RXRB REST IKZF2 ENSG00000261467 ELN TMEM270 RF00017-6321
GH07J073991 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +6.4 6352 1.2 CREB1 CEBPB ZNF623 ZBTB11 ZC3H11A ZNF781 ZNF518A ZNF697 ENSG00000261467 lnc-ELN-4 ELN TMEM270
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261467 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261467 Gene

Genomic Locations for ENSG00000261467 Gene
chr7:73,985,992-73,988,767
(GRCh38/hg38)
Size:
2,776 bases
Orientation:
Plus strand
chr7:73,400,322-73,403,097
(GRCh37/hg19)
Size:
2,776 bases
Orientation:
Plus strand

Genomic View for ENSG00000261467 Gene

Genes around ENSG00000261467 on UCSC Golden Path with GeneCards custom track
ENSG00000261467 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261467 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261467 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261467 Gene

Proteins for ENSG00000261467 Gene

Post-translational modifications for ENSG00000261467 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261467 Gene

Domains & Families for ENSG00000261467 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261467 Gene

Function for ENSG00000261467 Gene

Phenotypes From GWAS Catalog for ENSG00000261467 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261467 Gene

Localization for ENSG00000261467 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261467 Gene

Pathways & Interactions for ENSG00000261467 Gene

PathCards logo

SuperPathways for ENSG00000261467 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261467 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261467 Gene

Drugs & Compounds for ENSG00000261467 Gene

No Compound Related Data Available

Transcripts for ENSG00000261467 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261467 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000058C2AE_9606 lncRNA 2776 3

Ensembl: ENST00000567919 (view in UCSC) ,

LNCipedia: lnc-ELN-3:1,

NONCODE: NONHSAT121431.2,

URS00008BCB10_9606 lncRNA 474 3

LncBook: HSALNT0124301,

LNCipedia: lnc-ELN-3:2,

NONCODE: NONHSAT121432.2,

ENSG00000261467 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261467 Gene

No ASD Table

Relevant External Links for ENSG00000261467 Gene

GeneLoc Exon Structure for
ENSG00000261467

No data available for mRNA/cDNA for ENSG00000261467 Gene

Expression for ENSG00000261467 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261467 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261467 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x7.1), Heart - Atrial Appendage (x6.6), and Brain - Substantia nigra (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000261467: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261467 Gene

Orthologs for ENSG00000261467 Gene

Evolution for ENSG00000261467 Gene

ENSEMBL:
Gene Tree for ENSG00000261467 (if available)
TreeFam:
Gene Tree for ENSG00000261467 (if available)

No data available for Orthologs for ENSG00000261467 Gene

Paralogs for ENSG00000261467 Gene

No data available for Paralogs for ENSG00000261467 Gene

Variants for ENSG00000261467 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261467 Gene

Disorders for ENSG00000261467 Gene

No disorders were found for ENSG00000261467 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261467 Gene

Publications for ENSG00000261467 Gene

No publications were found for ENSG00000261467 Gene.

No data available for Mastermind for ENSG00000261467 Gene

Products for ENSG00000261467 Gene

Sources for ENSG00000261467 Gene