Aliases for ENSG00000261462 Gene

Subcategory (RNA class) for ENSG00000261462 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000261462 Gene

  • Novel Transcript 5
  • NONHSAG048123.2 91
  • Lnc-DMTF1-1 165
  • AC004023.1 5

External Ids for ENSG00000261462 Gene

Previous GeneCards Identifiers for ENSG00000261462 Gene

  • GC07P086738

Summaries for ENSG00000261462 Gene

GeneCards Summary for ENSG00000261462 Gene

ENSG00000261462 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261462 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261462 Gene

Genomics for ENSG00000261462 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261462 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J087110 Enhancer 1.1 Ensembl ENCODE 600.7 +1.4 1362 0.6 ZNF629 LEF1 IKZF1 ZNF692 JUND MTA2 PKNOX1 MTA1 REST BRD9 ENSG00000261462 TP53TG1 piR-36588-415 DMTF1 ELAPOR2
GH07J086328 Enhancer 0.5 Ensembl ENCODE 4 -780.3 -780338 1.6 NANOG POU5F1 ELAPOR2 ENSG00000261462 L13713-215 piR-59769-553 GRM3
GH07J086301 Enhancer 0.3 Ensembl ENCODE 4.5 -807.9 -807938 0.8 ENSG00000261462 L13713-215 MN309174-606 GRM3
GH07J087091 Enhancer 0.6 ENCODE 0.4 -17.9 -17859 0.2 SMARCA5 CTBP1 ZNF217 GATAD2B CUX1 GATA3 DPF2 FOXA1 RCOR1 SMARCE1 L13714-421 ENSG00000261462 ELAPOR2 LOC112268008 DMTF1
GH07J087100 Enhancer 0.4 ENCODE 0.4 -8.9 -8874 1.2 IKZF1 ZNF692 SCRT2 PRDM1 ELAPOR2 ENSG00000261462 L13714-421 DMTF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261462 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261462 Gene

Genomic Locations for ENSG00000261462 Gene
chr7:87,109,539-87,111,282
(GRCh38/hg38)
Size:
1,744 bases
Orientation:
Plus strand
chr7:86,738,855-86,740,598
(GRCh37/hg19)
Size:
1,744 bases
Orientation:
Plus strand

Genomic View for ENSG00000261462 Gene

Genes around ENSG00000261462 on UCSC Golden Path with GeneCards custom track
ENSG00000261462 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261462 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261462 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261462 Gene

Proteins for ENSG00000261462 Gene

Post-translational modifications for ENSG00000261462 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261462 Gene

Domains & Families for ENSG00000261462 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261462 Gene

Function for ENSG00000261462 Gene

Phenotypes From GWAS Catalog for ENSG00000261462 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261462 Gene

Localization for ENSG00000261462 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261462 Gene

Pathways & Interactions for ENSG00000261462 Gene

PathCards logo

SuperPathways for ENSG00000261462 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261462 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261462 Gene

Drugs & Compounds for ENSG00000261462 Gene

No Compound Related Data Available

Transcripts for ENSG00000261462 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261462 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001CE260_9606 lncRNA 1744 3

Ensembl: ENST00000561473 (view in UCSC) ,

LNCipedia: lnc-DMTF1-1:1,

NONCODE: NONHSAT121807.2,

ENSG00000261462 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261462 Gene

No ASD Table

Relevant External Links for ENSG00000261462 Gene

GeneLoc Exon Structure for
ENSG00000261462

No data available for mRNA/cDNA for ENSG00000261462 Gene

Expression for ENSG00000261462 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261462 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261462 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x4.6), Brain - Cerebellum (x4.6), Pituitary (x4.5), Brain - Nucleus accumbens (basal ganglia) (x4.4), and Brain - Cortex (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000261462: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261462 Gene

Orthologs for ENSG00000261462 Gene

Evolution for ENSG00000261462 Gene

ENSEMBL:
Gene Tree for ENSG00000261462 (if available)
TreeFam:
Gene Tree for ENSG00000261462 (if available)

No data available for Orthologs for ENSG00000261462 Gene

Paralogs for ENSG00000261462 Gene

No data available for Paralogs for ENSG00000261462 Gene

Variants for ENSG00000261462 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261462 Gene

Disorders for ENSG00000261462 Gene

No disorders were found for ENSG00000261462 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261462 Gene

Publications for ENSG00000261462 Gene

No publications were found for ENSG00000261462 Gene.

No data available for Mastermind for ENSG00000261462 Gene

Products for ENSG00000261462 Gene

Sources for ENSG00000261462 Gene