Aliases for ENSG00000261416 Gene

Subcategory (RNA class) for ENSG00000261416 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261416 Gene

  • Novel Transcript, Antisense To CORO1A 5
  • NONHSAG019079.2 91
  • HSALNG0110699 164
  • Lnc-BOLA2B-1 165
  • AC012645.3 5

External Ids for ENSG00000261416 Gene

Previous GeneCards Identifiers for ENSG00000261416 Gene

  • GC16M030194

Summaries for ENSG00000261416 Gene

GeneCards Summary for ENSG00000261416 Gene

ENSG00000261416 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261416 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261416 Gene

Genomics for ENSG00000261416 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261416 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J030182 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.3 -298 6.4 SP1 HNRNPL CTCF PRDM10 LEF1 ZNF692 POLR2A BACH1 TARDBP LARP7 CORO1A ENSG00000261416 LOC107984834 SMG1P5 SETD1A ZNF689 ZNF688 FBRS ZNF646 INO80E
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261416 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261416 Gene

Genomic Locations for ENSG00000261416 Gene
chr16:30,183,505-30,184,957
(GRCh38/hg38)
Size:
1,453 bases
Orientation:
Minus strand
chr16:30,194,826-30,196,278
(GRCh37/hg19)
Size:
1,453 bases
Orientation:
Minus strand

Genomic View for ENSG00000261416 Gene

Genes around ENSG00000261416 on UCSC Golden Path with GeneCards custom track
ENSG00000261416 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261416 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261416 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261416 Gene

Proteins for ENSG00000261416 Gene

Post-translational modifications for ENSG00000261416 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261416 Gene

Domains & Families for ENSG00000261416 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261416 Gene

Function for ENSG00000261416 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261416 Gene

Localization for ENSG00000261416 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261416 Gene

Pathways & Interactions for ENSG00000261416 Gene

PathCards logo

SuperPathways for ENSG00000261416 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261416 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261416 Gene

Drugs & Compounds for ENSG00000261416 Gene

No Compound Related Data Available

Transcripts for ENSG00000261416 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261416 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005B7C64_9606 lncRNA 520 4

Ensembl: ENST00000567153 (view in UCSC) ,

LncBook: HSALNT0229674,

LNCipedia: lnc-BOLA2B-1:1,

NONCODE: NONHSAT141712.2,

URS000049D1D9_9606 lncRNA 296 4

Ensembl: ENST00000566144 (view in UCSC) ,

LncBook: HSALNT0229671,

LNCipedia: lnc-BOLA2B-1:2,

NONCODE: NONHSAT141711.2,

URS00001A19B6_9606 lncRNA 470 3

Ensembl: ENST00000568506 (view in UCSC) ,

LNCipedia: lnc-BOLA2B-1:3,

NONCODE: NONHSAT141709.2,

URS0000D59AB0_9606 lncRNA 473 2

LncBook: HSALNT0229669,

LNCipedia: lnc-BOLA2B-1:8,

URS00009C02B7_9606 lncRNA 291 2

LncBook: HSALNT0229670,

NONCODE: NONHSAT173760.1,

ENSG00000261416 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261416 Gene

No ASD Table

Relevant External Links for ENSG00000261416 Gene

GeneLoc Exon Structure for
ENSG00000261416

No data available for mRNA/cDNA for ENSG00000261416 Gene

Expression for ENSG00000261416 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261416 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261416 Gene

This gene is overexpressed in Whole Blood (x24.3) and Spleen (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000261416: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261416 Gene

Orthologs for ENSG00000261416 Gene

Evolution for ENSG00000261416 Gene

ENSEMBL:
Gene Tree for ENSG00000261416 (if available)
TreeFam:
Gene Tree for ENSG00000261416 (if available)

No data available for Orthologs for ENSG00000261416 Gene

Paralogs for ENSG00000261416 Gene

No data available for Paralogs for ENSG00000261416 Gene

Variants for ENSG00000261416 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261416 Gene

Disorders for ENSG00000261416 Gene

No disorders were found for ENSG00000261416 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261416 Gene

Publications for ENSG00000261416 Gene

No publications were found for ENSG00000261416 Gene.

No data available for Mastermind for ENSG00000261416 Gene

Products for ENSG00000261416 Gene

Sources for ENSG00000261416 Gene