Aliases for ENSG00000261402 Gene

Subcategory (RNA class) for ENSG00000261402 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000261402 Gene

  • Novel Transcript 5
  • NONHSAG051864 94
  • Lnc-ACER2-7 170
  • AL591222.1 5

External Ids for ENSG00000261402 Gene

Summaries for ENSG00000261402 Gene

GeneCards Summary for ENSG00000261402 Gene

ENSG00000261402 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261402 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261402 Gene

Genomics for ENSG00000261402 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261402 Gene

Promoters and enhancers for ENSG00000261402 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J019925 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 750.6 +0.2 159 1.1 CTCF CC2D1A MAX RAD21 MLLT1 SP7 PRDM1 RELA ZBED1 IKZF1 ENSG00000261402 ENSG00000270712 lnc-SLC24A2-3
GH09J019924 Enhancer 0.4 Ensembl 750.6 -1.8 -1794 0.6 PRDM10 CEBPB FOSL1 CEBPG ENSG00000261402 DENND4C piR-47211-673
GH09J019101 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 13.8 -823.7 -823694 3.2 ZBTB40 SIX5 POLR2A HDAC2 ATF1 CREB1 HCFC1 MIXL1 ZNF362 MYC HAUS6 lnc-RRAGA-4 DENND4C ENSG00000273226 SCARNA8 ENSG00000261402 SLC24A2 RPS6 SAXO1 PLIN2
GH09J019997 Enhancer 0.9 Ensembl ENCODE 5.9 +73.4 73407 4.2 SP1 ETV6 RELA CREM ZBED1 IKZF1 BACH1 IKZF2 PKNOX1 CBFB ENSG00000261402 GLRX3P1 piR-43105-650
GH09J019934 Promoter/Enhancer 0.5 ENCODE CraniofacialAtlas 6.7 +8.4 8425 0.8 ENSG00000261402 ENSG00000270712 lnc-SLC24A2-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261402 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261402 Gene

Genomic Locations for ENSG00000261402 Gene
chr9:19,926,094-19,929,937
(GRCh38/hg38)
Size:
3,844 bases
Orientation:
Plus strand
chr9:19,926,092-19,929,935
(GRCh37/hg19)
Size:
3,844 bases
Orientation:
Plus strand

Genomic View for ENSG00000261402 Gene

Genes around ENSG00000261402 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261402 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261402 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261402 Gene

Proteins for ENSG00000261402 Gene

Post-translational modifications for ENSG00000261402 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261402 Gene

Domains & Families for ENSG00000261402 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261402 Gene

Function for ENSG00000261402 Gene

Phenotypes From GWAS Catalog for ENSG00000261402 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261402 Gene

Localization for ENSG00000261402 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261402 Gene

Pathways & Interactions for ENSG00000261402 Gene

PathCards logo

SuperPathways for ENSG00000261402 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261402 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261402 Gene

Drugs & Compounds for ENSG00000261402 Gene

No Compound Related Data Available

Transcripts for ENSG00000261402 Gene

mRNA/cDNA for ENSG00000261402 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) LNCipedia transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261402 Gene

No ASD Table

Relevant External Links for ENSG00000261402 Gene

GeneLoc Exon Structure for
ENSG00000261402

Expression for ENSG00000261402 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261402 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261402 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x9.8), Brain - Caudate (basal ganglia) (x9.8), Brain - Frontal Cortex (BA9) (x5.8), Brain - Cortex (x5.3), Brain - Nucleus accumbens (basal ganglia) (x4.8), and Brain - Anterior cingulate cortex (BA24) (x4.0).
genes like me logo Genes that share expression patterns with ENSG00000261402: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261402 Gene

Orthologs for ENSG00000261402 Gene

Evolution for ENSG00000261402 Gene

ENSEMBL:
Gene Tree for ENSG00000261402 (if available)
TreeFam:
Gene Tree for ENSG00000261402 (if available)

No data available for Orthologs for ENSG00000261402 Gene

Paralogs for ENSG00000261402 Gene

No data available for Paralogs for ENSG00000261402 Gene

Variants for ENSG00000261402 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261402 Gene

Disorders for ENSG00000261402 Gene

No disorders were found for ENSG00000261402 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261402 Gene

Publications for ENSG00000261402 Gene

No publications were found for ENSG00000261402 Gene.

No data available for External Links for ENSG00000261402 Gene

Products for ENSG00000261402 Gene

Sources for ENSG00000261402 Gene