Aliases for ENSG00000261392 Gene

Subcategory (RNA class) for ENSG00000261392 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000261392 Gene

  • Novel Transcript 5
  • Lnc-C16orf72-1 170
  • NONHSAG018534 94
  • HSALNG0109448 169
  • AC087190.2 5

External Ids for ENSG00000261392 Gene

Previous GeneCards Identifiers for ENSG00000261392 Gene

  • GC16P009162

Summaries for ENSG00000261392 Gene

GeneCards Summary for ENSG00000261392 Gene

ENSG00000261392 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261392 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261392 Gene

Genomics for ENSG00000261392 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261392 Gene

Promoters and enhancers for ENSG00000261392 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J009067 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 750.6 -0.2 -201 2 ZBTB40 SMARCE1 POLR2A USF2 CC2D1A L3MBTL2 TEAD4 ZKSCAN8 GTF2F1 ZFX ENSG00000261392 lnc-USP7-4 lnc-C16orf72-9
GH16J009069 Enhancer 0.7 Ensembl dbSUPER 750.6 +1.9 1947 0.2 PRDM10 PKNOX1 ZNF316 FOXK2 ZNF592 ATF7 ENSG00000261392 NONHSAG018535.2
GH16J009072 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.6 +4.3 4345 2.6 SMARCE1 HLF L3MBTL2 CEBPB CEBPG SMARCA4 CREM TRIM24 ZBED1 MTA1 ENSG00000261392 NONHSAG018535.2
GH16J009075 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +9.1 9077 4.6 ZBTB40 SIX5 SMARCE1 POLR2A CREB1 HCFC1 CC2D1A ELF1 L3MBTL2 TEAD4 USP7 METTL22 C16orf72 ENSG00000260349 ENSG00000261392 NONHSAG018535.2
GH16J009081 Enhancer 0.8 ENCODE dbSUPER 0.4 +13.0 12992 0.6 NR2F1 NR2F6 ELF3 CDC5L ZNF644 CEBPA GATAD2A RXRB ZNF184 NR2F2 USP7 METTL22 NONHSAG018535.2 ENSG00000261392
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261392 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261392 Gene

Genomic Locations for ENSG00000261392 Gene
chr16:9,068,554-9,072,412
(GRCh38/hg38)
Size:
3,859 bases
Orientation:
Plus strand
chr16:9,162,411-9,166,269
(GRCh37/hg19)
Size:
3,859 bases
Orientation:
Plus strand

Genomic View for ENSG00000261392 Gene

Genes around ENSG00000261392 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261392 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261392 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261392 Gene

Proteins for ENSG00000261392 Gene

Post-translational modifications for ENSG00000261392 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261392 Gene

Domains & Families for ENSG00000261392 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261392 Gene

Function for ENSG00000261392 Gene

Phenotypes From GWAS Catalog for ENSG00000261392 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261392 Gene

Localization for ENSG00000261392 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261392 Gene

Pathways & Interactions for ENSG00000261392 Gene

PathCards logo

SuperPathways for ENSG00000261392 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261392 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261392 Gene

Drugs & Compounds for ENSG00000261392 Gene

No Compound Related Data Available

Transcripts for ENSG00000261392 Gene

mRNA/cDNA for ENSG00000261392 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(1) LncBook transcripts :
(2) NONCODE transcripts :
(4) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261392 Gene

No ASD Table

Relevant External Links for ENSG00000261392 Gene

GeneLoc Exon Structure for
ENSG00000261392

Expression for ENSG00000261392 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261392 Gene

genes like me logo Genes that share expression patterns with ENSG00000261392: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261392 Gene

Orthologs for ENSG00000261392 Gene

Evolution for ENSG00000261392 Gene

ENSEMBL:
Gene Tree for ENSG00000261392 (if available)
TreeFam:
Gene Tree for ENSG00000261392 (if available)

No data available for Orthologs for ENSG00000261392 Gene

Paralogs for ENSG00000261392 Gene

No data available for Paralogs for ENSG00000261392 Gene

Variants for ENSG00000261392 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261392 Gene

Disorders for ENSG00000261392 Gene

No disorders were found for ENSG00000261392 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261392 Gene

Publications for ENSG00000261392 Gene

No publications were found for ENSG00000261392 Gene.

No data available for External Links for ENSG00000261392 Gene

Products for ENSG00000261392 Gene

Sources for ENSG00000261392 Gene