ENSG00000261327 Gene (RNA Gene)

 

GC16M088210
GIFtS:
8

Aliases for ENSG00000261327 Gene

Subcategory (RNA class) for ENSG00000261327 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000261327 Gene

  • Novel Transcript 5
  • NONHSAG020276 92
  • HSALNG0113478 167
  • AC134312.5 5
  • Lnc-CA5A-4 168

External Ids for ENSG00000261327 Gene

Summaries for ENSG00000261327 Gene

GeneCards Summary for ENSG00000261327 Gene

ENSG00000261327 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261327 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261327 Gene

Genomics for ENSG00000261327 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261327 Gene

Promoters and enhancers for ENSG00000261327 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J088185 Enhancer 0.7 ENCODE CraniofacialAtlas dbSUPER 500.7 +0.1 60 2.2 BHLHE40 MNT ENSG00000261327 LINC02182 LOC105371401
GH16J088301 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 5.7 -118.6 -118552 7.9 FOS REST MIER1 NR2F2 MYC ZNF316 ARNT CTCF TRIM28 CEBPG HSALNG0113490 ENSG00000261327 GALNS ZNF469 ENSG00000261273 HSALNG0113498
GH16J088261 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 5 -77.0 -76998 4.3 ZNF217 ZNF639 ZNF10 ZIC2 AFF1 REST HES1 KLF7 TOE1 CTBP1 BANP ENSG00000261327 CYBA ZC3H18 RNF166 lnc-BANP-12 ENSG00000261273 lnc-ZNF469-3 ZNF469
GH16J088274 Enhancer 0.9 Ensembl CraniofacialAtlas dbSUPER 6.1 -87.7 -87672 2.8 ZBTB17 CEBPG ZFHX2 ETV1 CEBPB ZNF366 EGR2 ZNF7 EGR1 ENSG00000261327 lnc-ZNF469-3 lnc-BANP-12 ENSG00000261273 ZNF469
GH16J088189 Enhancer 0.3 Ensembl dbSUPER 0.7 -3.4 -3372 1.8 ENSG00000261327 LINC02182 lnc-BANP-9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261327 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261327 Gene

Genomic Locations for ENSG00000261327 Gene
chr16:88,177,298-88,186,929
(GRCh38/hg38)
Size:
9,632 bases
Orientation:
Minus strand
chr16:88,210,904-88,219,696
(GRCh37/hg19)
Size:
8,793 bases
Orientation:
Minus strand

Genomic View for ENSG00000261327 Gene

Genes around ENSG00000261327 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261327 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261327 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000261327 Gene

Proteins for ENSG00000261327 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000261327 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261327 Gene

Domains & Families for ENSG00000261327 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261327 Gene

Function for ENSG00000261327 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000261327 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261327 Gene

Localization for ENSG00000261327 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261327 Gene

Pathways & Interactions for ENSG00000261327 Gene

PathCards logo

SuperPathways for ENSG00000261327 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000261327 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261327 Gene

Drugs & Compounds for ENSG00000261327 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000261327 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000261327 Gene

12 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
8 NONCODE transcripts :
6 LncBook transcripts :
10 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261327 Gene

No ASD Table

Relevant External Links for ENSG00000261327 Gene

GeneLoc Exon Structure for
ENSG00000261327

Expression for ENSG00000261327 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261327 Gene

mRNA expression in normal human tissues for ENSG00000261327 Gene
mRNA expression by GTEx for ENSG00000261327 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261327 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x10.3) and Cervix - Ectocervix (x4.8).
genes like me logo Genes that share expression patterns with ENSG00000261327: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261327 Gene

Orthologs for ENSG00000261327 Gene

Evolution for ENSG00000261327 Gene

ENSEMBL:
Gene Tree for ENSG00000261327 (if available)
TreeFam:
Gene Tree for ENSG00000261327 (if available)

No data available for Orthologs for ENSG00000261327 Gene

Paralogs for ENSG00000261327 Gene

No data available for Paralogs for ENSG00000261327 Gene

Variants for ENSG00000261327 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261327 Gene

Disorders for ENSG00000261327 Gene

No disorders were found for ENSG00000261327 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261327 Gene

Publications for ENSG00000261327 Gene

No publications were found for ENSG00000261327 Gene.

No data available for Mastermind for ENSG00000261327 Gene

Products for ENSG00000261327 Gene

Sources for ENSG00000261327 Gene