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Aliases for ENSG00000261227 Gene

Subcategory (RNA class) for ENSG00000261227 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000261227 Gene

  • AC140912.1 5

External Ids for ENSG00000261227 Gene

ORGUL Members for ENSG00000261227 Gene

Summaries for ENSG00000261227 Gene

GeneCards Summary for ENSG00000261227 Gene

ENSG00000261227 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261227 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000261227 Gene

Genomics for ENSG00000261227 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261227 Gene

Promoters and enhancers for ENSG00000261227 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J073232 Enhancer 1 Ensembl ENCODE 650.7 +0.8 773 1.6 NFIB SIN3A FEZF1 ZNF335 ZNF366 ZSCAN5C ATF7 FOS KLF13 ZNF362 ENSG00000261227 ENSG00000279120 ZFHX3
GH16J073228 Enhancer 0.5 FANTOM5 ENCODE 0.7 -3.3 -3285 1.2 FOS ENSG00000261227 C16orf47 ZFHX3
GH16J073226 Enhancer 0.5 UCNEbase 0.7 -5.0 -4979 0.2 PKNOX1 ENSG00000261227 C16orf47 ZFHX3
GH16J073213 Enhancer 0.8 Ensembl ENCODE 0.4 -16.9 -16874 3 SOX13 FOXA2 NANOG FOXA1 CTBP1 JUND GATA3 RBAK FOS KDM1A ZFHX3 ENSG00000261227 C16orf47
GH16J073176 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.2 -55.3 -55254 0.4 BRCA1 RAD21 RFX5 ZNF121 FOS RCOR1 ZNF362 CEBPB ZEB2 ZNF217 ZFHX3 C16orf47 ENSG00000261227
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000261227 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261227 Gene

Genomic Locations for ENSG00000261227 Gene
chr16:73,232,055-73,233,970
(GRCh38/hg38)
Size:
1,916 bases
Orientation:
Plus strand
chr16:73,265,954-73,267,869
(GRCh37/hg19)
Size:
1,916 bases
Orientation:
Plus strand

Genomic View for ENSG00000261227 Gene

Genes around ENSG00000261227 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261227 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261227 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261227 Gene

Proteins for ENSG00000261227 Gene

Post-translational modifications for ENSG00000261227 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261227 Gene

Domains & Families for ENSG00000261227 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000261227 Gene

Function for ENSG00000261227 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261227 Gene

Localization for ENSG00000261227 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261227 Gene

Pathways & Interactions for ENSG00000261227 Gene

SuperPathways for ENSG00000261227 Gene

No Data Available

Interacting Proteins for ENSG00000261227 Gene

Gene Ontology (GO) - Biological Process for ENSG00000261227 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261227 Gene

Drugs & Compounds for ENSG00000261227 Gene

No Compound Related Data Available

Transcripts for ENSG00000261227 Gene

mRNA/cDNA for ENSG00000261227 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261227 Gene

No ASD Table

Relevant External Links for ENSG00000261227 Gene

GeneLoc Exon Structure for
ENSG00000261227

Expression for ENSG00000261227 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261227 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261227 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x9.7), Brain - Putamen (basal ganglia) (x9.1), Brain - Caudate (basal ganglia) (x7.4), and Brain - Substantia nigra (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000261227: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261227 Gene

Orthologs for ENSG00000261227 Gene

Evolution for ENSG00000261227 Gene

ENSEMBL:
Gene Tree for ENSG00000261227 (if available)
TreeFam:
Gene Tree for ENSG00000261227 (if available)

No data available for Orthologs for ENSG00000261227 Gene

Paralogs for ENSG00000261227 Gene

No data available for Paralogs for ENSG00000261227 Gene

Variants for ENSG00000261227 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261227 Gene

Disorders for ENSG00000261227 Gene

No disorders were found for ENSG00000261227 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261227 Gene

Publications for ENSG00000261227 Gene

No publications were found for ENSG00000261227 Gene.

Products for ENSG00000261227 Gene

Sources for ENSG00000261227 Gene

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