Aliases for ENSG00000261220 Gene

Subcategory (RNA class) for ENSG00000261220 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000261220 Gene

  • Novel Transcript 5
  • NONHSAG051341 92
  • Lnc-WISP1-2 168
  • AC103706.1 5

External Ids for ENSG00000261220 Gene

Summaries for ENSG00000261220 Gene

GeneCards Summary for ENSG00000261220 Gene

ENSG00000261220 is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ENSG00000261220 include Pancreatic Cancer.

Additional gene information for ENSG00000261220 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261220 Gene

Genomics for ENSG00000261220 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261220 Gene

Promoters and enhancers for ENSG00000261220 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J133567 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -1.2 -1231 9.7 ZBTB40 ZNF217 CTCF ZSCAN5C SIN3A NRF1 TCF12 MYC POLR2G USF1 ST3GAL1 ENSG00000261220 lnc-NDRG1-7 HSALNG0068755
GH08J133579 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 15.1 +8.7 8693 5.5 CTCF FOS SRF BATF NR2F1 ZFP91 ATF2 RAD21 GATA2 JUNB HSALNG0068755 ENSG00000261220 ST3GAL1 piR-58557-085
GH08J133591 Enhancer 0.4 Ensembl 14.8 +18.9 18917 0.6 CEBPG CEBPB NFE2 L3MBTL2 ZNF770 ENSG00000261220 HSALNG0068755 piR-58557-085
GH08J133605 Enhancer 0.4 Ensembl 10.9 +32.9 32917 1 FOS BHLHE40 HLF USF2 CEBPB piR-32559-450 piR-38716-160 piR-58557-085 ENSG00000261220 HSALNG0068755
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261220 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261220 Gene

Genomic Locations for ENSG00000261220 Gene
chr8:133,573,183-133,573,861
(GRCh38/hg38)
Size:
679 bases
Orientation:
Plus strand
chr8:134,584,414-134,586,104
(GRCh37/hg19)
Size:
1,691 bases
Orientation:
Plus strand

Genomic View for ENSG00000261220 Gene

Genes around ENSG00000261220 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261220 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261220 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261220 Gene

Proteins for ENSG00000261220 Gene

Post-translational modifications for ENSG00000261220 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261220 Gene

Domains & Families for ENSG00000261220 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261220 Gene

Function for ENSG00000261220 Gene

Phenotypes From GWAS Catalog for ENSG00000261220 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261220 Gene

Localization for ENSG00000261220 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261220 Gene

Pathways & Interactions for ENSG00000261220 Gene

PathCards logo

SuperPathways for ENSG00000261220 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000261220 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261220 Gene

Drugs & Compounds for ENSG00000261220 Gene

No Compound Related Data Available

Transcripts for ENSG00000261220 Gene

mRNA/cDNA for ENSG00000261220 Gene

4 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261220 Gene

No ASD Table

Relevant External Links for ENSG00000261220 Gene

GeneLoc Exon Structure for
ENSG00000261220

Expression for ENSG00000261220 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261220 Gene

genes like me logo Genes that share expression patterns with ENSG00000261220: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261220 Gene

Orthologs for ENSG00000261220 Gene

Evolution for ENSG00000261220 Gene

ENSEMBL:
Gene Tree for ENSG00000261220 (if available)
TreeFam:
Gene Tree for ENSG00000261220 (if available)

No data available for Orthologs for ENSG00000261220 Gene

Paralogs for ENSG00000261220 Gene

No data available for Paralogs for ENSG00000261220 Gene

Variants for ENSG00000261220 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261220 Gene

Disorders for ENSG00000261220 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000261220 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
pancreatic cancer
  • pancreatic carcinoma
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000261220: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261220 Gene

Publications for ENSG00000261220 Gene

No publications were found for ENSG00000261220 Gene.

No data available for Mastermind for ENSG00000261220 Gene

Products for ENSG00000261220 Gene

Sources for ENSG00000261220 Gene