Aliases for ENSG00000261218 Gene

Subcategory (RNA class) for ENSG00000261218 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261218 Gene

  • Novel Transcript 5
  • NONHSAG020107.2 91
  • HSALNG0113011 164
  • Lnc-PLCG2-1 165
  • AC099524.1 5

External Ids for ENSG00000261218 Gene

Summaries for ENSG00000261218 Gene

GeneCards Summary for ENSG00000261218 Gene

ENSG00000261218 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261218 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261218 Gene

Genomics for ENSG00000261218 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261218 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J081737 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 609.9 +1.1 1134 3.6 GATAD2A CTCF TEAD4 SOX13 JUND FOXA1 LARP7 ZNF143 PKNOX1 RXRB ENSG00000261218 PLCG2 CMIP GAN piR-43106-088 SDR42E1
GH16J081769 Enhancer 0.4 Ensembl dbSUPER 6 +31.7 31653 0.2 TBX21 ENSG00000261218 PLCG2 piR-43106-088 SDR42E1
GH16J081729 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -7.6 -7562 2.8 ZNF221 CREB1 GATAD2A CTCF ZBTB33 ATF7 PRDM10 ZNF629 RFX1 IKZF1 HSALNG0113010 CMIP ENSG00000261838 ENSG00000261218 PLCG2
GH16J081745 Promoter/Enhancer 1.2 ENCODE CraniofacialAtlas 0.4 +8.1 8092 1.2 PRDM10 SIX5 POLR2A GABPA ZNF143 RBFOX2 PKNOX1 PATZ1 SMAD5 IRF2 CMIP GAN ENSG00000261218 PLCG2 piR-43106-088 SDR42E1
GH16J081751 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +14.3 14267 1.5 SP1 HNRNPL LEF1 POLR2A BACH1 JUND MTA2 PKNOX1 ZNF24 MTA1 CMIP PLCG2 ENSG00000261218 piR-43106-088 SDR42E1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261218 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261218 Gene

Genomic Locations for ENSG00000261218 Gene
chr16:81,738,248-81,767,868
(GRCh38/hg38)
Size:
29,621 bases
Orientation:
Plus strand
chr16:81,771,853-81,801,311
(GRCh37/hg19)
Size:
29,459 bases
Orientation:
Plus strand

Genomic View for ENSG00000261218 Gene

Genes around ENSG00000261218 on UCSC Golden Path with GeneCards custom track
ENSG00000261218 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261218 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261218 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261218 Gene

Proteins for ENSG00000261218 Gene

Post-translational modifications for ENSG00000261218 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261218 Gene

Domains & Families for ENSG00000261218 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261218 Gene

Function for ENSG00000261218 Gene

Phenotypes From GWAS Catalog for ENSG00000261218 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261218 Gene

Localization for ENSG00000261218 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261218 Gene

Pathways & Interactions for ENSG00000261218 Gene

PathCards logo

SuperPathways for ENSG00000261218 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261218 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261218 Gene

Drugs & Compounds for ENSG00000261218 Gene

No Compound Related Data Available

Transcripts for ENSG00000261218 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261218 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000010459A_9606 lncRNA 389 4

Ensembl: ENST00000565674 (view in UCSC) ,

LncBook: HSALNT0234276,

LNCipedia: lnc-PLCG2-1:4,

NONCODE: NONHSAT143957.2,

URS00001A26DD_9606 lncRNA 756 3

Ensembl: ENST00000565272 (view in UCSC) ,

LNCipedia: lnc-PLCG2-1:8,

NONCODE: NONHSAT143960.2,

URS00003FFA11_9606 lncRNA 674 3

Ensembl: ENST00000562180 (view in UCSC) ,

LNCipedia: lnc-PLCG2-1:10,

NONCODE: NONHSAT143962.2,

URS0000154200_9606 lncRNA 605 3

Ensembl: ENST00000566191 (view in UCSC) ,

LNCipedia: lnc-PLCG2-1:7,

NONCODE: NONHSAT143958.2,

URS000055413E_9606 lncRNA 480 3

Ensembl: ENST00000563954 (view in UCSC) ,

LNCipedia: lnc-PLCG2-1:9,

NONCODE: NONHSAT143961.2,

ENSG00000261218 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261218 Gene

No ASD Table

Relevant External Links for ENSG00000261218 Gene

GeneLoc Exon Structure for
ENSG00000261218

No data available for mRNA/cDNA for ENSG00000261218 Gene

Expression for ENSG00000261218 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261218 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261218 Gene

This gene is overexpressed in Whole Blood (x22.3) and Spleen (x5.4).
genes like me logo Genes that share expression patterns with ENSG00000261218: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261218 Gene

Orthologs for ENSG00000261218 Gene

Evolution for ENSG00000261218 Gene

ENSEMBL:
Gene Tree for ENSG00000261218 (if available)
TreeFam:
Gene Tree for ENSG00000261218 (if available)

No data available for Orthologs for ENSG00000261218 Gene

Paralogs for ENSG00000261218 Gene

No data available for Paralogs for ENSG00000261218 Gene

Variants for ENSG00000261218 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261218 Gene

Disorders for ENSG00000261218 Gene

Additional Disease Information for ENSG00000261218

No disorders were found for ENSG00000261218 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261218 Gene

Publications for ENSG00000261218 Gene

No publications were found for ENSG00000261218 Gene.

No data available for Mastermind for ENSG00000261218 Gene

Products for ENSG00000261218 Gene

Sources for ENSG00000261218 Gene