ENSG00000261193 Gene (RNA Gene)

 

GC16M088079
GIFtS:
5

Aliases for ENSG00000261193 Gene

Subcategory (RNA class) for ENSG00000261193 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000261193 Gene

  • Novel Transcript 5
  • NONHSAG020272 94
  • AC134312.4 5
  • Lnc-CA5A-1 170

External Ids for ENSG00000261193 Gene

Previous GeneCards Identifiers for ENSG00000261193 Gene

  • GC16M088112

Summaries for ENSG00000261193 Gene

GeneCards Summary for ENSG00000261193 Gene

ENSG00000261193 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261193 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261193 Gene

Genomics for ENSG00000261193 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261193 Gene

Promoters and enhancers for ENSG00000261193 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH16J088088 Enhancer 0.3 dbSUPER 750.6 -1.3 -1290 0.7 KLF1 ENSG00000260166 ENSG00000261193 piR-52009-002 LOC105369246 ENSG00000205037
GH16J088091 Enhancer 0.6 ENCODE CraniofacialAtlas dbSUPER 6.3 -4.3 -4341 0.9 GLIS1 LOC105369246 piR-47970-002 ENSG00000261193 ENSG00000205037
GH16J088085 Enhancer 0.2 Ensembl 6.4 +3.3 3282 0.2 ZNF469 ENSG00000261193 ENSG00000260166 HSALNG0113455
GH16J088084 Enhancer 0.2 ENCODE 0.6 +2.7 2713 0.2 ZNF469 ENSG00000260166 ENSG00000261193 HSALNG0113455
GH16J088083 Enhancer 0.2 dbSUPER 0.6 +3.6 3564 0.2 ZNF469 ENSG00000260166 ENSG00000261193 HSALNG0113455
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261193 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261193 Gene

Genomic Locations for ENSG00000261193 Gene
chr16:88,079,161-88,087,383
(GRCh38/hg38)
Size:
8,223 bases
Orientation:
Minus strand
chr16:88,112,767-88,120,989
(GRCh37/hg19)
Size:
8,223 bases
Orientation:
Minus strand

Genomic View for ENSG00000261193 Gene

Genes around ENSG00000261193 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261193 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261193 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000261193 Gene

Proteins for ENSG00000261193 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000261193 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261193 Gene

Domains & Families for ENSG00000261193 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261193 Gene

Function for ENSG00000261193 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000261193 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261193 Gene

Localization for ENSG00000261193 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261193 Gene

Pathways & Interactions for ENSG00000261193 Gene

PathCards logo

SuperPathways for ENSG00000261193 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261193 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261193 Gene

Drugs & Compounds for ENSG00000261193 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000261193 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000261193 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261193 Gene

No ASD Table

Relevant External Links for ENSG00000261193 Gene

GeneLoc Exon Structure for
ENSG00000261193

Expression for ENSG00000261193 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261193 Gene

mRNA expression in normal human tissues for ENSG00000261193 Gene
mRNA expression by GTEx for ENSG00000261193 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261193 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x7.0), Brain - Cortex (x7.0), Brain - Anterior cingulate cortex (BA24) (x6.4), Spleen (x6.2), and Brain - Hippocampus (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000261193: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261193 Gene

Orthologs for ENSG00000261193 Gene

Evolution for ENSG00000261193 Gene

ENSEMBL:
Gene Tree for ENSG00000261193 (if available)
TreeFam:
Gene Tree for ENSG00000261193 (if available)

No data available for Orthologs for ENSG00000261193 Gene

Paralogs for ENSG00000261193 Gene

No data available for Paralogs for ENSG00000261193 Gene

Variants for ENSG00000261193 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261193 Gene

Disorders for ENSG00000261193 Gene

No disorders were found for ENSG00000261193 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261193 Gene

Publications for ENSG00000261193 Gene

No publications were found for ENSG00000261193 Gene.

No data available for External Links for ENSG00000261193 Gene

Products for ENSG00000261193 Gene

Sources for ENSG00000261193 Gene