Aliases for ENSG00000261177 Gene

Subcategory (RNA class) for ENSG00000261177 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000261177 Gene

  • Novel Transcript 5
  • NONHSAG020208.2 91
  • AC135012.1 5
  • Lnc-EMC8-6 165

External Ids for ENSG00000261177 Gene

Summaries for ENSG00000261177 Gene

GeneCards Summary for ENSG00000261177 Gene

ENSG00000261177 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261177 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261177 Gene

Genomics for ENSG00000261177 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261177 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J086088 Enhancer 0.8 Ensembl CraniofacialAtlas 633.5 +0.4 418 2.6 NR2C1 NR2C2 ELF1 NR2F1 SMARCA5 EBF1 NR2F6 RARA MYC MAX ENSG00000261177 piR-41141-010 IRF8 FOXF1
GH16J086100 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 5.2 -11.2 -11218 1.8 CREB1 GATAD2A ATF7 SOX13 ZIC2 RXRB CEBPA SCRT2 TCF7 FOXA1 ENSG00000261177 HSALNG0113273 IRF8 FOXF1
GH16J086074 Enhancer 1.1 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 +15.1 15118 2 ZIC2 ZSCAN4 FOXA1 FOS NONO NR2F2 TBX3 PLRG1 RXRA NBN piR-41141-010 ENSG00000261177 IRF8 FOXF1
GH16J086077 Enhancer 0.6 Ensembl 0.4 +11.4 11420 0.8 NFE2 CEBPB ZNF316 RCOR1 MAFG EP300 SMC3 EZH2 NFE2L2 ADNP ENSG00000261177 piR-41141-010 IRF8 FOXF1
GH16J086118 Enhancer 0.7 ENCODE 0.3 -29.2 -29209 0.9 BACH1 IKZF2 RCOR1 TRIM22 ZBTB20 ARID3A DPF2 RELB GATAD2B FOS MTHFSD HSALNG0113272 HSALNG0113273 ENSG00000261177 IRF8 FOXF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261177 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261177 Gene

Genomic Locations for ENSG00000261177 Gene
chr16:86,081,409-86,089,719
(GRCh38/hg38)
Size:
8,311 bases
Orientation:
Minus strand
chr16:86,115,015-86,123,132
(GRCh37/hg19)
Size:
8,118 bases
Orientation:
Minus strand

Genomic View for ENSG00000261177 Gene

Genes around ENSG00000261177 on UCSC Golden Path with GeneCards custom track
ENSG00000261177 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261177 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261177 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261177 Gene

Proteins for ENSG00000261177 Gene

Post-translational modifications for ENSG00000261177 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261177 Gene

Domains & Families for ENSG00000261177 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261177 Gene

Function for ENSG00000261177 Gene

Phenotypes From GWAS Catalog for ENSG00000261177 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261177 Gene

Localization for ENSG00000261177 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261177 Gene

Pathways & Interactions for ENSG00000261177 Gene

PathCards logo

SuperPathways for ENSG00000261177 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261177 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261177 Gene

Drugs & Compounds for ENSG00000261177 Gene

No Compound Related Data Available

Transcripts for ENSG00000261177 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261177 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001BFAE7_9606 lncRNA 7430 3

Ensembl: ENST00000563931 (view in UCSC) ,

LNCipedia: lnc-EMC8-6:3,

NONCODE: NONHSAT144165.2,

URS00008BB832_9606 lncRNA 7408 2

LNCipedia: lnc-EMC8-6:4,

NONCODE: NONHSAT144166.2,

URS00008BA0BF_9606 lncRNA 3118 2

LNCipedia: lnc-EMC8-6:1,

NONCODE: NONHSAT144167.2,

URS00008BB9AF_9606 lncRNA 6818 1

LNCipedia: lnc-EMC8-6:2,

URS00009BBBB6_9606 lncRNA 2917 1

NONCODE: NONHSAT174149.1,

ENSG00000261177 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261177 Gene

No ASD Table

Relevant External Links for ENSG00000261177 Gene

GeneLoc Exon Structure for
ENSG00000261177

No data available for mRNA/cDNA for ENSG00000261177 Gene

Expression for ENSG00000261177 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261177 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261177 Gene

This gene is overexpressed in Testis (x52.4).
genes like me logo Genes that share expression patterns with ENSG00000261177: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261177 Gene

Orthologs for ENSG00000261177 Gene

Evolution for ENSG00000261177 Gene

ENSEMBL:
Gene Tree for ENSG00000261177 (if available)
TreeFam:
Gene Tree for ENSG00000261177 (if available)

No data available for Orthologs for ENSG00000261177 Gene

Paralogs for ENSG00000261177 Gene

No data available for Paralogs for ENSG00000261177 Gene

Variants for ENSG00000261177 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261177 Gene

Disorders for ENSG00000261177 Gene

No disorders were found for ENSG00000261177 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261177 Gene

Publications for ENSG00000261177 Gene

No publications were found for ENSG00000261177 Gene.

No data available for Mastermind for ENSG00000261177 Gene

Products for ENSG00000261177 Gene

Sources for ENSG00000261177 Gene