Aliases for ENSG00000261170 Gene

Subcategory (RNA class) for ENSG00000261170 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000261170 Gene

  • Novel Transcript, Antisense To CLEC18B 5
  • Lnc-NPIPB15-2 170
  • NONHSAG019975 94
  • HSALNG0112688 169
  • AC009053.3 5

External Ids for ENSG00000261170 Gene

Previous GeneCards Identifiers for ENSG00000261170 Gene

  • GC16P074456

Summaries for ENSG00000261170 Gene

GeneCards Summary for ENSG00000261170 Gene

ENSG00000261170 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261170 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261170 Gene

Genomics for ENSG00000261170 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000261170 Gene

Promoters and enhancers for ENSG00000261170 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J074421 Promoter/Enhancer 0.5 EPDnew Ensembl 750.6 -1.1 -1119 2.8 CLEC18B ENSG00000261170 RFWD3 ENSG00000214331 lnc-GLG1-3 RF00017-2150
GH16J074396 Enhancer 0.7 Ensembl ENCODE dbSUPER 6.7 -25.4 -25419 1.4 BCOR NFIC NFIA ENSG00000261170 RFWD3 piR-58496-024 piR-61401-002 RF00017-2150
GH16J074397 Enhancer 0.5 Ensembl CraniofacialAtlas dbSUPER 6.8 -23.7 -23719 1.6 piR-61401-002 RFWD3 ENSG00000261170 piR-58496-024 RF00017-2150
GH16J074442 Enhancer 0.5 Ensembl 7 +21.3 21281 1.2 MAFK MLLT1 ZNF316 MAFG EMSY ENSG00000261170 RFWD3 piR-55449 lnc-NPIPB15-4 RF00017-2150
GH16J074430 Enhancer 0.6 Ensembl 0.4 +8.2 8181 0.6 CTCF USF2 RAD21 REST BHLHE40 TRIM22 ZNF10 FOXK2 SMC3 MNT lnc-NPIPB15-4 ENSG00000261170 CLEC18B RF00017-2150
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261170 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000261170 Gene

Genomic Locations for ENSG00000261170 Gene
chr16:74,422,120-74,441,937
(GRCh38/hg38)
Size:
19,818 bases
Orientation:
Plus strand
chr16:74,456,018-74,469,152
(GRCh37/hg19)
Size:
13,135 bases
Orientation:
Plus strand

Genomic View for ENSG00000261170 Gene

Genes around ENSG00000261170 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000261170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261170 Gene

Proteins for ENSG00000261170 Gene

Post-translational modifications for ENSG00000261170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261170 Gene

Domains & Families for ENSG00000261170 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261170 Gene

Function for ENSG00000261170 Gene

Phenotypes From GWAS Catalog for ENSG00000261170 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261170 Gene

Localization for ENSG00000261170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261170 Gene

Pathways & Interactions for ENSG00000261170 Gene

PathCards logo

SuperPathways for ENSG00000261170 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000261170 Gene

Drugs & Compounds for ENSG00000261170 Gene

No Compound Related Data Available

Transcripts for ENSG00000261170 Gene

mRNA/cDNA for ENSG00000261170 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(4) NONCODE transcripts :
(4) LNCipedia transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261170 Gene

No ASD Table

Relevant External Links for ENSG00000261170 Gene

GeneLoc Exon Structure for
ENSG00000261170

Expression for ENSG00000261170 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000261170 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000261170 Gene

This gene is overexpressed in Kidney - Cortex (x27.7), Brain - Cerebellar Hemisphere (x11.2), and Brain - Cerebellum (x7.3).
genes like me logo Genes that share expression patterns with ENSG00000261170: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261170 Gene

Orthologs for ENSG00000261170 Gene

Evolution for ENSG00000261170 Gene

ENSEMBL:
Gene Tree for ENSG00000261170 (if available)
TreeFam:
Gene Tree for ENSG00000261170 (if available)

No data available for Orthologs for ENSG00000261170 Gene

Paralogs for ENSG00000261170 Gene

No data available for Paralogs for ENSG00000261170 Gene

Variants for ENSG00000261170 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261170 Gene

Disorders for ENSG00000261170 Gene

No disorders were found for ENSG00000261170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261170 Gene

Publications for ENSG00000261170 Gene

No publications were found for ENSG00000261170 Gene.

No data available for External Links for ENSG00000261170 Gene

Products for ENSG00000261170 Gene

Sources for ENSG00000261170 Gene