Aliases for ENSG00000261118 Gene

Subcategory (RNA class) for ENSG00000261118 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261118 Gene

  • Novel Transcript, Antisense To SPG7 5
  • NONHSAG020346.2 91
  • Lnc-ANKRD11-1 165
  • HSALNG0113611 164
  • AC092123.1 5

External Ids for ENSG00000261118 Gene

Previous GeneCards Identifiers for ENSG00000261118 Gene

  • GC16M089558
  • GC16M089494

Summaries for ENSG00000261118 Gene

GeneCards Summary for ENSG00000261118 Gene

ENSG00000261118 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261118 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261118 Gene

Genomics for ENSG00000261118 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261118 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J089503 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 629.8 +1.3 1253 6.3 ZNF221 CREB1 GATAD2A ZBTB33 HNRNPL ATF7 PRDM10 ZNF629 TFE3 LEF1 SPG7 ENSG00000261118 NONHSAG020345.2 AFG3L1P MC1R ZC3H18 ENSG00000268218 ANKRD11 TCF25 ENSG00000259877
GH16J089558 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 65.6 -54.3 -54311 7.9 SP1 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 TFE3 ZNF512 SOX13 RPL13 SNORD68 NONHSAG020350.2-001 NONHSAG020350.2-002 piR-31703 AFG3L1P ENSG00000268218 ANKRD11 ENSG00000261118 ACSF3
GH16J088809 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 37 +697.0 697043 4.4 CEBPG SP1 GATAD2A CTCF HNRNPL TEAD4 PRDM10 ZNF629 TFE3 NFKBIZ APRT lnc-GALNS-1 ENSG00000259877 ANKRD11 SNORD68 ENSG00000261118 ZC3H18 GALNS ENSG00000268218 RPL13
GH16J089717 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 36.3 -212.7 -212733 7.5 SP1 HNRNPL GATAD2A ZNF629 SIX5 LEF1 IKZF1 ZNF692 POLR2A BACH1 VPS9D1 ZNF276 AFG3L1P ENSG00000261118 ANKRD11 ENSG00000268218 MC1R CDK10 TCF25 ACSF3
GH16J089920 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 32.3 -415.3 -415276 6.8 GATAD2A HNRNPL PRDM10 REST TFE3 RFX1 LEF1 SOX13 NFKBIZ RFX5 TUBB3 ENSG00000259006 NONHSAG020376.2 ANKRD11 CDK10 AFG3L1P ENSG00000268218 TCF25 ENSG00000261118 MC1R
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261118 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261118 Gene

Genomic Locations for ENSG00000261118 Gene
chr16:89,490,799-89,508,320
(GRCh38/hg38)
Size:
17,522 bases
Orientation:
Minus strand

Genomic View for ENSG00000261118 Gene

Genes around ENSG00000261118 on UCSC Golden Path with GeneCards custom track
ENSG00000261118 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261118 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261118 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261118 Gene

Proteins for ENSG00000261118 Gene

Post-translational modifications for ENSG00000261118 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261118 Gene

Domains & Families for ENSG00000261118 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261118 Gene

Function for ENSG00000261118 Gene

Phenotypes From GWAS Catalog for ENSG00000261118 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261118 Gene

Localization for ENSG00000261118 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261118 Gene

Pathways & Interactions for ENSG00000261118 Gene

PathCards logo

SuperPathways for ENSG00000261118 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261118 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261118 Gene

Drugs & Compounds for ENSG00000261118 Gene

No Compound Related Data Available

Transcripts for ENSG00000261118 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261118 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039EFCB_9606 lncRNA 871 3

Ensembl: ENST00000565623 (view in UCSC) ,

LNCipedia: lnc-ANKRD11-1:1,

NONCODE: NONHSAT144533.2,

URS00002E957E_9606 lncRNA 405 3

Ensembl: ENST00000565310 (view in UCSC) ,

LNCipedia: lnc-ANKRD11-1:2,

NONCODE: NONHSAT144534.2,

URS00009C1E7A_9606 lncRNA 502 2

LncBook: HSALNT0235498,

NONCODE: NONHSAT174219.1,

URS0000D5A97D_9606 lncRNA 3653 1

LNCipedia: lnc-ANKRD11-1:3,

URS0000D58A8E_9606 lncRNA 3294 1

LNCipedia: lnc-ANKRD11-1:7,

ENSG00000261118 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261118 Gene

No ASD Table

Relevant External Links for ENSG00000261118 Gene

GeneLoc Exon Structure for
ENSG00000261118

No data available for mRNA/cDNA for ENSG00000261118 Gene

Expression for ENSG00000261118 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261118 Gene

genes like me logo Genes that share expression patterns with ENSG00000261118: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261118 Gene

Orthologs for ENSG00000261118 Gene

Evolution for ENSG00000261118 Gene

ENSEMBL:
Gene Tree for ENSG00000261118 (if available)
TreeFam:
Gene Tree for ENSG00000261118 (if available)

No data available for Orthologs for ENSG00000261118 Gene

Paralogs for ENSG00000261118 Gene

No data available for Paralogs for ENSG00000261118 Gene

Variants for ENSG00000261118 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261118 Gene

Disorders for ENSG00000261118 Gene

Additional Disease Information for ENSG00000261118

No disorders were found for ENSG00000261118 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261118 Gene

Publications for ENSG00000261118 Gene

No publications were found for ENSG00000261118 Gene.

No data available for Mastermind for ENSG00000261118 Gene

Products for ENSG00000261118 Gene

Sources for ENSG00000261118 Gene