Aliases for ENSG00000261098 Gene

Subcategory (RNA class) for ENSG00000261098 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for ENSG00000261098 Gene

  • Novel Transcript 5
  • NONHSAG009530.2 91
  • Lnc-CWF19L2-1 165
  • HSALNG0086950 164
  • AP000766.1 5

External Ids for ENSG00000261098 Gene

Previous GeneCards Identifiers for ENSG00000261098 Gene

  • GC11M107182

Summaries for ENSG00000261098 Gene

GeneCards Summary for ENSG00000261098 Gene

ENSG00000261098 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261098 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261098 Gene

Genomics for ENSG00000261098 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261098 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J107456 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 19.4 -141.0 -141030 2.6 PRDM10 RFX1 POLR2A ZHX2 FOXA1 GABPA RELA RBFOX2 RXRB SMAD5 CWF19L2 lnc-ELMOD1-1 ENSG00000261098 ASS1P13 SMARCE1P1 GUCY1A2
GH11J107856 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.6 -542.3 -542262 4.7 HNRNPL PRDM10 ZNF512 IKZF1 ZNF692 POLR2A BACH1 ETV6 FOXA1 LARP7 SLC35F2 ENSG00000261098 DDX10 piR-57133-091 RF00017-1018 SLN
GH11J108198 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.6 -883.9 -883929 5.2 LEF1 BACH1 JUND MTA2 PKNOX1 ZNF24 IKZF2 DPF2 HDAC1 YY1 ACAT1 ENSG00000261098 DDX10 ATM NPAT lnc-C11orf65-1
GH11J107396 Enhancer 0.7 Ensembl ENCODE 19.2 -80.5 -80529 2.8 SCRT2 NFE2 NFIC ZFHX2 EGR2 MAFK NFIB piR-53029-017 CWF19L2 ENSG00000261098 ASS1P13 MN309301 piR-48965-026 GUCY1A2
GH11J107839 Enhancer 1 ENCODE 12.3 -525.5 -525519 5.6 SP1 CREB1 ZBTB33 ZNF629 LEF1 IKZF1 BACH1 JUND STAT3 PRDM1 SLC35F2 ENSG00000261098 piR-57133-091 LOC203930 SLN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261098 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261098 Gene

Genomic Locations for ENSG00000261098 Gene
chr11:107,307,974-107,316,271
(GRCh38/hg38)
Size:
8,298 bases
Orientation:
Minus strand
chr11:107,182,858-107,186,997
(GRCh37/hg19)
Size:
4,140 bases
Orientation:
Minus strand

Genomic View for ENSG00000261098 Gene

Genes around ENSG00000261098 on UCSC Golden Path with GeneCards custom track
ENSG00000261098 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261098 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261098 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261098 Gene

Proteins for ENSG00000261098 Gene

Post-translational modifications for ENSG00000261098 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261098 Gene

Domains & Families for ENSG00000261098 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261098 Gene

Function for ENSG00000261098 Gene

Phenotypes From GWAS Catalog for ENSG00000261098 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261098 Gene

Localization for ENSG00000261098 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261098 Gene

Pathways & Interactions for ENSG00000261098 Gene

PathCards logo

SuperPathways for ENSG00000261098 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261098 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261098 Gene

Drugs & Compounds for ENSG00000261098 Gene

No Compound Related Data Available

Transcripts for ENSG00000261098 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261098 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039EC3B_9606 lncRNA 4140 3

Ensembl: ENST00000561746 (view in UCSC) ,

LNCipedia: lnc-CWF19L2-1:1,

NONCODE: NONHSAT023992.2,

URS00008BF09C_9606 lncRNA 4371 3

LncBook: HSALNT0180756,

LNCipedia: lnc-CWF19L2-1:2,

NONCODE: NONHSAT023991.2,

URS00008B2735_9606 lncRNA 1247 3

LncBook: HSALNT0180758,

LNCipedia: lnc-CWF19L2-1:3,

NONCODE: NONHSAT023993.2,

URS0001A0B3F7_9606 lncRNA 1180 1

ENA: MN309406.1:1..1180:ncRNA,

ENSG00000261098 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261098 Gene

No ASD Table

Relevant External Links for ENSG00000261098 Gene

GeneLoc Exon Structure for
ENSG00000261098

No data available for mRNA/cDNA for ENSG00000261098 Gene

Expression for ENSG00000261098 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261098 Gene

genes like me logo Genes that share expression patterns with ENSG00000261098: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261098 Gene

Orthologs for ENSG00000261098 Gene

Evolution for ENSG00000261098 Gene

ENSEMBL:
Gene Tree for ENSG00000261098 (if available)
TreeFam:
Gene Tree for ENSG00000261098 (if available)

No data available for Orthologs for ENSG00000261098 Gene

Paralogs for ENSG00000261098 Gene

No data available for Paralogs for ENSG00000261098 Gene

Variants for ENSG00000261098 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261098 Gene

Disorders for ENSG00000261098 Gene

Additional Disease Information for ENSG00000261098

No disorders were found for ENSG00000261098 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261098 Gene

Publications for ENSG00000261098 Gene

No publications were found for ENSG00000261098 Gene.

No data available for Mastermind for ENSG00000261098 Gene

Products for ENSG00000261098 Gene

Sources for ENSG00000261098 Gene