Aliases for ENSG00000261079 Gene

Subcategory (RNA class) for ENSG00000261079 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000261079 Gene

  • Novel Transcript 5
  • NONHSAG019972.2 91
  • Lnc-NPIPB15-1 165
  • AC009053.3 5

External Ids for ENSG00000261079 Gene

Previous GeneCards Identifiers for ENSG00000261079 Gene

  • GC16P074401

Summaries for ENSG00000261079 Gene

GeneCards Summary for ENSG00000261079 Gene

ENSG00000261079 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261079 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261079 Gene

Genomics for ENSG00000261079 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261079 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J074367 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 606.5 +0.9 939 4 CREB1 ZBTB33 ZNF629 PRDM10 TFE3 ZNF512 IKZF1 ZNF692 BACH1 LARP7 ENSG00000261079 ENSG00000214331 LOC283922 RF00017-2151 lnc-CLEC18B-2 PSMD7 CLEC18B RFWD3 NPIPB15 piR-39678-011
GH16J075241 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 15.9 +883.0 882994 17.5 CEBPG HNRNPL CREB1 GATAD2A ZBTB33 TEAD4 PRDM10 TFE3 NFKBIZ ZNF692 BCAR1 ENSG00000280152 lnc-CTRB2-1 ENSG00000214331 RFWD3 ENSG00000259972 WDR59 ENSG00000261783 ADAT1 ENSG00000260884
GH16J074740 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 15.9 +375.7 375732 5.1 HNRNPL CREB1 PRDM10 ZNF629 IKZF1 ZNF692 TARDBP ZHX2 JUND FOXA1 FA2H ENSG00000214331 ENSG00000261079 ENSG00000259972 NPIPB15 ADAT1 MLKL WDR59 ENSG00000260884 RNU6-237P
GH16J074983 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.4 +619.4 619438 6.2 ZNF221 BRCA1 SP1 CREB1 GATAD2A ZBTB33 PRDM10 ZNF512 SIX5 LEF1 WDR59 ENSG00000214331 RFWD3 ENSG00000261783 ENSG00000239763 ENSG00000259972 ENSG00000260884 ADAT1 ENSG00000261079 NPIPB15
GH16J074665 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 10.4 +299.3 299338 3.2 SP1 HNRNPL CREB1 GATAD2A ZNF629 ZNF512 POLR2A BACH1 FOS LARP7 RFWD3 TMPOP2 lnc-MLKL-3 lnc-NPIPB15-6 ENSG00000214331 ADAT1 KARS1 ENSG00000261079 GLG1 NPIPB15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261079 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261079 Gene

Genomic Locations for ENSG00000261079 Gene
chr16:74,367,462-74,369,826
(GRCh38/hg38)
Size:
2,365 bases
Orientation:
Plus strand
chr16:74,401,360-74,403,724
(GRCh37/hg19)
Size:
2,365 bases
Orientation:
Plus strand

Genomic View for ENSG00000261079 Gene

Genes around ENSG00000261079 on UCSC Golden Path with GeneCards custom track
ENSG00000261079 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261079 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261079 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261079 Gene

Proteins for ENSG00000261079 Gene

Post-translational modifications for ENSG00000261079 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261079 Gene

Domains & Families for ENSG00000261079 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261079 Gene

Function for ENSG00000261079 Gene

Phenotypes From GWAS Catalog for ENSG00000261079 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261079 Gene

Localization for ENSG00000261079 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261079 Gene

Pathways & Interactions for ENSG00000261079 Gene

PathCards logo

SuperPathways for ENSG00000261079 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261079 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261079 Gene

Drugs & Compounds for ENSG00000261079 Gene

No Compound Related Data Available

Transcripts for ENSG00000261079 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261079 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005A61C3_9606 lncRNA 2365 3

Ensembl: ENST00000563701 (view in UCSC) ,

LNCipedia: lnc-NPIPB15-1:1,

NONCODE: NONHSAT143682.2,

ENSG00000261079 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261079 Gene

No ASD Table

Relevant External Links for ENSG00000261079 Gene

GeneLoc Exon Structure for
ENSG00000261079

No data available for mRNA/cDNA for ENSG00000261079 Gene

Expression for ENSG00000261079 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261079 Gene

Orthologs for ENSG00000261079 Gene

Evolution for ENSG00000261079 Gene

ENSEMBL:
Gene Tree for ENSG00000261079 (if available)
TreeFam:
Gene Tree for ENSG00000261079 (if available)

No data available for Orthologs for ENSG00000261079 Gene

Paralogs for ENSG00000261079 Gene

No data available for Paralogs for ENSG00000261079 Gene

Variants for ENSG00000261079 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000261079 Gene

Disorders for ENSG00000261079 Gene

No disorders were found for ENSG00000261079 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000261079 Gene

Publications for ENSG00000261079 Gene

No publications were found for ENSG00000261079 Gene.

No data available for Mastermind for ENSG00000261079 Gene

Products for ENSG00000261079 Gene

Sources for ENSG00000261079 Gene