Aliases for ENSG00000261071 Gene

Subcategory (RNA class) for ENSG00000261071 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000261071 Gene

  • Novel Transcript, Antisense To NOL7 5
  • NONHSAG043048.2 91
  • HSALNG0048173 164
  • Lnc-RANBP9-1 165
  • AL441883.1 5

External Ids for ENSG00000261071 Gene

Summaries for ENSG00000261071 Gene

GeneCards Summary for ENSG00000261071 Gene

ENSG00000261071 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000261071 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000261071 Gene

Genomics for ENSG00000261071 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000261071 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J013613 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 +0.1 118 3.7 SP1 HNRNPL CREB1 GATAD2A CTCF REST ZNF629 TFE3 SIX5 LEF1 ENSG00000261071 NOL7 RANBP9 RF00017-5281 SIRT5
GH06J013611 Enhancer 0.5 Ensembl 0.7 +3.7 3744 0.8 SCRT2 EED MEF2D SCRT1 IKZF1 IKZF2 LOC105374938 SIRT5 ENSG00000261071 NOL7 piR-43105-557 RF00017-5281
GH06J013624 Enhancer 0.7 ENCODE 0.4 -9.5 -9469 0.2 CTCF PRDM1 RFX1 REST RAD21 CTBP1 BCLAF1 SMC3 YY1 RBM22 piR-38351-389 ENSG00000261071 NOL7 RF00017-5281 lnc-GFOD1-3 RANBP9
GH06J013610 Enhancer 0.4 Ensembl 0.7 +4.6 4633 0.6 SCRT2 FOXA2 SCRT1 LOC105374938 piR-43105-557 SIRT5 ENSG00000261071 NOL7 RF00017-5281
GH06J013621 Enhancer 0.4 UCNEbase 0.4 -6.1 -6067 0.2 RBFOX2 ENSG00000261071 NOL7 piR-38351-389 RF00017-5281 RANBP9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000261071 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000261071 Gene

Genomic Locations for ENSG00000261071 Gene
chr6:13,610,390-13,615,545
(GRCh38/hg38)
Size:
5,156 bases
Orientation:
Minus strand
chr6:13,614,343-13,615,387
(GRCh37/hg19)
Size:
1,045 bases
Orientation:
Minus strand

Genomic View for ENSG00000261071 Gene

Genes around ENSG00000261071 on UCSC Golden Path with GeneCards custom track
ENSG00000261071 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000261071 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000261071 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000261071 Gene

Proteins for ENSG00000261071 Gene

Post-translational modifications for ENSG00000261071 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000261071 Gene

Domains & Families for ENSG00000261071 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000261071 Gene

Function for ENSG00000261071 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000261071 Gene

Localization for ENSG00000261071 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000261071 Gene

Pathways & Interactions for ENSG00000261071 Gene

PathCards logo

SuperPathways for ENSG00000261071 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000261071 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000261071 Gene

Drugs & Compounds for ENSG00000261071 Gene

No Compound Related Data Available

Transcripts for ENSG00000261071 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000261071 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001B6EE0_9606 lncRNA 1045 3

Ensembl: ENST00000566170 (view in UCSC) ,

LNCipedia: lnc-RANBP9-1:1,

NONCODE: NONHSAT107811.2,

URS00009B8EC9_9606 lncRNA 1350 2

LncBook: HSALNT0101587,

NONCODE: NONHSAT208772.1,

URS00009C3555_9606 lncRNA 219 2

LncBook: HSALNT0101588,

NONCODE: NONHSAT208773.1,

URS0000D58242_9606 lncRNA 3103 1

LNCipedia: lnc-RANBP9-1:3,

URS0000D5DF62_9606 lncRNA 1743 1

LNCipedia: lnc-RANBP9-1:2,

ENSG00000261071 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000261071 Gene

No ASD Table

Relevant External Links for ENSG00000261071 Gene

GeneLoc Exon Structure for
ENSG00000261071

No data available for mRNA/cDNA for ENSG00000261071 Gene

Expression for ENSG00000261071 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000261071 Gene

genes like me logo Genes that share expression patterns with ENSG00000261071: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000261071 Gene

Orthologs for ENSG00000261071 Gene

Evolution for ENSG00000261071 Gene

ENSEMBL:
Gene Tree for ENSG00000261071 (if available)
TreeFam:
Gene Tree for ENSG00000261071 (if available)

No data available for Orthologs for ENSG00000261071 Gene

Paralogs for ENSG00000261071 Gene

No data available for Paralogs for ENSG00000261071 Gene

Variants for ENSG00000261071 Gene

Variation tolerance for ENSG00000261071 Gene

Gene Damage Index Score: 0.02; 0.52% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000261071 Gene

Disorders for ENSG00000261071 Gene

Additional Disease Information for ENSG00000261071

No disorders were found for ENSG00000261071 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000261071 Gene

Publications for ENSG00000261071 Gene

No publications were found for ENSG00000261071 Gene.

No data available for Mastermind for ENSG00000261071 Gene

Products for ENSG00000261071 Gene

Sources for ENSG00000261071 Gene