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Aliases for ENSG00000260988 Gene

Subcategory (RNA class) for ENSG00000260988 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000260988 Gene

  • AC090260.1 5

External Ids for ENSG00000260988 Gene

ORGUL Members for ENSG00000260988 Gene

Previous GeneCards Identifiers for ENSG00000260988 Gene

  • GC15P078434

Summaries for ENSG00000260988 Gene

GeneCards Summary for ENSG00000260988 Gene

ENSG00000260988 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260988 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000260988 Gene

Genomics for ENSG00000260988 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260988 Gene

Promoters and enhancers for ENSG00000260988 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J078139 Enhancer 0.7 ENCODE 650.7 -0.3 -278 3.3 FOXA2 MAX RAD21 YY1 GATA3 EGR1 HNF4G RXRA HLF REST ENSG00000260988 CIB2 TBC1D2B SH2D7 ENSG00000199633 LOC645752 IDH3A GC15M078021
GH15J077417 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 22.8 -721.3 -721294 4.7 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 HMG20A PEAK1 SCAPER ENSG00000259562 ENSG00000260988 WDR61 TBC1D2B LOC101929457 TSPAN3 GC15P077340
GH15J078436 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.6 +297.5 297526 4.2 HDGF PKNOX1 CLOCK FOXA2 ARNT ARID4B NEUROD1 SIN3A DMAP1 ZNF2 IREB2 CHRNA5 TBC1D2B ENSG00000259562 ENSG00000260988 WDR61 ENSG00000259792 PSMA4 ENSG00000259474 GC15M078021
GH15J078871 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.5 +732.6 732564 4.6 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC ZNF610 ZNF585B GLIS1 RCOR2 MORF4L1 IREB2 ENSG00000259562 PSMA4 TBC1D2B RNU6-415P ENSG00000260988 WDR61 ENSG00000177699 ENSG00000259322
GH15J077621 Enhancer 1.1 ENCODE dbSUPER 19.2 -518.3 -518338 2.7 HDGF ZNF133 GLI4 ZNF2 ZBTB7B TCF12 ZNF207 MCM3 NCOA1 ZNF488 ENSG00000259562 IREB2 TBC1D2B WDR61 HMG20A ENSG00000259322 ENSG00000260988 PSMA4 HYKK LOC645752
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000260988 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260988 Gene

Genomic Locations for ENSG00000260988 Gene
chr15:78,141,243-78,143,173
(GRCh38/hg38)
Size:
1,931 bases
Orientation:
Plus strand
chr15:78,433,585-78,435,515
(GRCh37/hg19)
Size:
1,931 bases
Orientation:
Plus strand

Genomic View for ENSG00000260988 Gene

Genes around ENSG00000260988 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260988 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260988 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260988 Gene

Proteins for ENSG00000260988 Gene

Post-translational modifications for ENSG00000260988 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260988 Gene

Domains & Families for ENSG00000260988 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000260988 Gene

Function for ENSG00000260988 Gene

Phenotypes From GWAS Catalog for ENSG00000260988 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260988 Gene

Localization for ENSG00000260988 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260988 Gene

Pathways & Interactions for ENSG00000260988 Gene

SuperPathways for ENSG00000260988 Gene

No Data Available

Interacting Proteins for ENSG00000260988 Gene

Gene Ontology (GO) - Biological Process for ENSG00000260988 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260988 Gene

Drugs & Compounds for ENSG00000260988 Gene

No Compound Related Data Available

Transcripts for ENSG00000260988 Gene

mRNA/cDNA for ENSG00000260988 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260988 Gene

No ASD Table

Relevant External Links for ENSG00000260988 Gene

GeneLoc Exon Structure for
ENSG00000260988

Expression for ENSG00000260988 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000260988 Gene

genes like me logo Genes that share expression patterns with ENSG00000260988: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260988 Gene

Orthologs for ENSG00000260988 Gene

Evolution for ENSG00000260988 Gene

ENSEMBL:
Gene Tree for ENSG00000260988 (if available)
TreeFam:
Gene Tree for ENSG00000260988 (if available)

No data available for Orthologs for ENSG00000260988 Gene

Paralogs for ENSG00000260988 Gene

No data available for Paralogs for ENSG00000260988 Gene

Variants for ENSG00000260988 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260988 Gene

Disorders for ENSG00000260988 Gene

No disorders were found for ENSG00000260988 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260988 Gene

Publications for ENSG00000260988 Gene

No publications were found for ENSG00000260988 Gene.

Products for ENSG00000260988 Gene

Sources for ENSG00000260988 Gene

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