Aliases for ENSG00000260892 Gene

Subcategory (RNA class) for ENSG00000260892 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000260892 Gene

  • Novel Transcript, Antisense To CSPG4 5
  • NONHSAG017483.2 91
  • HSALNG0107311 164
  • AC105020.4 5

External Ids for ENSG00000260892 Gene

Previous GeneCards Identifiers for ENSG00000260892 Gene

  • GC15P075971

Summaries for ENSG00000260892 Gene

GeneCards Summary for ENSG00000260892 Gene

ENSG00000260892 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260892 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260892 Gene

Genomics for ENSG00000260892 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260892 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J075678 Enhancer 0.5 Ensembl dbSUPER 600.7 +1.1 1074 0.2 ZNF189 HIC1 ENSG00000203392 ENSG00000260892 IMP3 CSPG4
GH15J075646 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -26.8 -26767 7.3 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 TFE3 LEF1 IKZF1 ZNF692 SNX33 SNUPN IMP3 MF281486 lnc-SNUPN-1 lnc-ODF3L1-5 SIN3A MIR631 MAN2C1 UBE2Q2
GH15J075671 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 0.7 -2.6 -2569 4.6 HNRNPL ZBTB33 PRDM10 IKZF1 ZNF692 ZIC2 ZNF600 ZNF341 ZBTB20 SP1 ENSG00000261043 MAN2C1 SNX33 MIR631 CSPG4 ENSG00000260892 IMP3 lnc-ODF3L1-5
GH15J075658 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -11.5 -11506 12 HNRNPL CREB1 ZBTB33 TEAD4 PRDM10 ZNF629 ZNF692 ZIC2 ZSCAN4 RXRB SNX33 MIR631 MAN2C1 ENSG00000260274 ENSG00000260892 IMP3 lnc-ODF3L1-5 CSPG4
GH15J075670 Enhancer 0.5 ENCODE dbSUPER 0.4 -5.2 -5190 0.3 POLR2A SP7 MIR631 ENSG00000260892 IMP3 lnc-ODF3L1-5 CSPG4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260892 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260892 Gene

Genomic Locations for ENSG00000260892 Gene
chr15:75,676,227-75,677,162
(GRCh38/hg38)
Size:
936 bases
Orientation:
Plus strand
chr15:75,968,568-75,969,503
(GRCh37/hg19)
Size:
936 bases
Orientation:
Plus strand

Genomic View for ENSG00000260892 Gene

Genes around ENSG00000260892 on UCSC Golden Path with GeneCards custom track
ENSG00000260892 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260892 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260892 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260892 Gene

Proteins for ENSG00000260892 Gene

Post-translational modifications for ENSG00000260892 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260892 Gene

Domains & Families for ENSG00000260892 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260892 Gene

Function for ENSG00000260892 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260892 Gene

Localization for ENSG00000260892 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260892 Gene

Pathways & Interactions for ENSG00000260892 Gene

PathCards logo

SuperPathways for ENSG00000260892 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260892 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260892 Gene

Drugs & Compounds for ENSG00000260892 Gene

No Compound Related Data Available

Transcripts for ENSG00000260892 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260892 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000039AF7E_9606 lncRNA 563 3

Ensembl: ENST00000569467 (view in UCSC) ,

LncBook: HSALNT0222924,

NONCODE: NONHSAT047358.2,

ENSG00000260892 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260892 Gene

No ASD Table

Relevant External Links for ENSG00000260892 Gene

GeneLoc Exon Structure for
ENSG00000260892

No data available for mRNA/cDNA for ENSG00000260892 Gene

Expression for ENSG00000260892 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260892 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260892 Gene

This gene is overexpressed in Artery - Tibial (x6.8), Artery - Aorta (x5.0), and Artery - Coronary (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000260892: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260892 Gene

Orthologs for ENSG00000260892 Gene

Evolution for ENSG00000260892 Gene

ENSEMBL:
Gene Tree for ENSG00000260892 (if available)
TreeFam:
Gene Tree for ENSG00000260892 (if available)

No data available for Orthologs for ENSG00000260892 Gene

Paralogs for ENSG00000260892 Gene

No data available for Paralogs for ENSG00000260892 Gene

Variants for ENSG00000260892 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260892 Gene

Disorders for ENSG00000260892 Gene

No disorders were found for ENSG00000260892 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260892 Gene

Publications for ENSG00000260892 Gene

No publications were found for ENSG00000260892 Gene.

No data available for Mastermind for ENSG00000260892 Gene

Products for ENSG00000260892 Gene

Sources for ENSG00000260892 Gene