Aliases for ENSG00000260806 Gene

Subcategory (RNA class) for ENSG00000260806 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000260806 Gene

  • Novel Transcript, Antisense To PAPOLA 5
  • HSALNG0103511 169
  • NONHSAG015828 94
  • Lnc-ATG2B-16 170
  • AL163051.1 5

External Ids for ENSG00000260806 Gene

Previous GeneCards Identifiers for ENSG00000260806 Gene

  • GC14M096968
  • GC14M096503
  • GC14M096505

Summaries for ENSG00000260806 Gene

GeneCards Summary for ENSG00000260806 Gene

ENSG00000260806 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260806 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260806 Gene

Genomics for ENSG00000260806 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260806 Gene

Promoters and enhancers for ENSG00000260806 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J096500 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 764.3 -0.6 -573 3.8 ZNF24 ZBTB40 CTCF SIX5 RBPJ POLR2A NR2F6 ATF1 CREB1 HCFC1 PAPOLA ENSG00000260806 LOC730202 NONHSAG015829.2-001 hsa-miR-5095-139 ATG2B SNHG10 SCARNA13
GH14J096573 Enhancer 1 Ensembl ENCODE 12.4 -71.9 -71880 2.8 ZNF362 SP1 ZSCAN21 RXRA ZBTB8A PRDM10 ZEB2 FOXA2 PATZ1 ZNF629 ENSG00000260806 PAPOLA NONHSAG015832.2 ENSG00000258702
GH14J097378 Enhancer 0.8 Ensembl ENCODE 5.1 -877.4 -877380 4.2 ETV6 MNT ZNF687 ZBTB33 IKZF1 CTBP1 PKNOX1 EED BCL11A RUNX3 ENSG00000260806 piR-34344 HSALNG0103561
GH14J096566 Enhancer 0.4 UCNEbase 6.9 -64.7 -64652 0.2 CTCF ENSG00000260806 NONHSAG015832.2 ENSG00000258702 PAPOLA
GH14J097386 Enhancer 0.6 Ensembl 4.7 -885.6 -885580 2.2 ETV6 MLLT1 ZNF687 CREM IKZF1 IKZF2 DPF2 EED BCL11A RUNX3 ENSG00000260806 piR-34344 HSALNG0103561
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260806 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260806 Gene

Genomic Locations for ENSG00000260806 Gene
chr14:96,500,810-96,502,321
(GRCh38/hg38)
Size:
1,512 bases
Orientation:
Minus strand
chr14:96,967,147-96,968,658
(GRCh37/hg19)
Size:
1,512 bases
Orientation:
Minus strand

Genomic View for ENSG00000260806 Gene

Genes around ENSG00000260806 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260806 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260806 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260806 Gene

Proteins for ENSG00000260806 Gene

Post-translational modifications for ENSG00000260806 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260806 Gene

Domains & Families for ENSG00000260806 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260806 Gene

Function for ENSG00000260806 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260806 Gene

Localization for ENSG00000260806 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260806 Gene

Pathways & Interactions for ENSG00000260806 Gene

PathCards logo

SuperPathways for ENSG00000260806 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260806 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260806 Gene

Drugs & Compounds for ENSG00000260806 Gene

No Compound Related Data Available

Transcripts for ENSG00000260806 Gene

mRNA/cDNA for ENSG00000260806 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(7) RNACentral transcripts :
(7) LNCipedia transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260806 Gene

No ASD Table

Relevant External Links for ENSG00000260806 Gene

GeneLoc Exon Structure for
ENSG00000260806

Expression for ENSG00000260806 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260806 Gene

This gene is overexpressed in Testis (x9.1).

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260806 Gene

Orthologs for ENSG00000260806 Gene

Evolution for ENSG00000260806 Gene

ENSEMBL:
Gene Tree for ENSG00000260806 (if available)
TreeFam:
Gene Tree for ENSG00000260806 (if available)

No data available for Orthologs for ENSG00000260806 Gene

Paralogs for ENSG00000260806 Gene

No data available for Paralogs for ENSG00000260806 Gene

Variants for ENSG00000260806 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260806 Gene

Disorders for ENSG00000260806 Gene

No disorders were found for ENSG00000260806 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260806 Gene

Publications for ENSG00000260806 Gene

No publications were found for ENSG00000260806 Gene.

No data available for External Links for ENSG00000260806 Gene

Products for ENSG00000260806 Gene

Sources for ENSG00000260806 Gene