Aliases for ENSG00000260803 Gene

Subcategory (RNA class) for ENSG00000260803 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for ENSG00000260803 Gene

  • Novel Transcript 5
  • NONHSAG018145.2 91
  • HSALNG0108687 164
  • Lnc-POLR3K-3 165
  • Z84723.1 5

External Ids for ENSG00000260803 Gene

Previous GeneCards Identifiers for ENSG00000260803 Gene

  • GC16M000067
  • GC16M000023

Summaries for ENSG00000260803 Gene

GeneCards Summary for ENSG00000260803 Gene

ENSG00000260803 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260803 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260803 Gene

Genomics for ENSG00000260803 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260803 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J000033 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE 600.7 -0.1 -122 1.8 CEBPG CREB1 ATF7 TARDBP ZSCAN4 ZNF501 POLR2A ZNF311 CEBPA SCRT2 ENSG00000260803 LUC7L ENSG00000228779 LMF1 IL9RP3 ENSG00000262528 WDR90 SNRNP25 LINC02867 METTL26
GH16J000034 Promoter 0.6 Ensembl 600.7 +1.1 1094 0.2 TARDBP POLR2A ZNF2 ENSG00000260803 SNRNP25 IL9RP3 WASIR2 POLR3K
GH16J000022 Promoter 0.9 EPDnew Ensembl 0.4 +12.1 12094 1 CTCF EGR1 ZNF335 BHLHE40 WASIR2 ENSG00000260803 POLR3K
GH16J000029 Enhancer 0.3 Ensembl 0.4 +5.5 5494 0.2 ZNF600 SNRNP25 ENSG00000260803 IL9RP3 WASIR2 POLR3K
GH16J000031 Enhancer 0.2 Ensembl 0.7 +3.1 3094 1 IL9RP3 ENSG00000260803 WASIR2 POLR3K
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260803 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260803 Gene

Genomic Locations for ENSG00000260803 Gene
chr16:14,044-35,195
(GRCh38/hg38)
Size:
21,152 bases
Orientation:
Minus strand
chr16:67,514-85,195
(GRCh37/hg19)
Size:
17,682 bases
Orientation:
Minus strand

Genomic View for ENSG00000260803 Gene

Genes around ENSG00000260803 on UCSC Golden Path with GeneCards custom track
ENSG00000260803 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260803 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260803 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260803 Gene

Proteins for ENSG00000260803 Gene

Post-translational modifications for ENSG00000260803 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260803 Gene

Domains & Families for ENSG00000260803 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260803 Gene

Function for ENSG00000260803 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260803 Gene

Localization for ENSG00000260803 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260803 Gene

Pathways & Interactions for ENSG00000260803 Gene

PathCards logo

SuperPathways for ENSG00000260803 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260803 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260803 Gene

Drugs & Compounds for ENSG00000260803 Gene

No Compound Related Data Available

Transcripts for ENSG00000260803 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260803 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000D589FB_9606 lncRNA 773 2

Ensembl: ENST00000568710 (view in UCSC) ,

LNCipedia: lnc-POLR3K-3:1,

URS00009B8BA5_9606 lncRNA 1365 3

LncBook: HSALNT0226109,

LNCipedia: lnc-POLR3K-3:5,

NONCODE: NONHSAT051727.2,

URS00009C1756_9606 lncRNA 4243 2

LNCipedia: lnc-POLR3K-3:4,

NONCODE: NONHSAT051726.2,

URS00009BEE76_9606 lncRNA 2789 2

LNCipedia: lnc-POLR3K-3:2,

NONCODE: NONHSAT051724.2,

URS00009BF201_9606 lncRNA 2506 2

LNCipedia: lnc-POLR3K-3:3,

NONCODE: NONHSAT051725.2,

ENSG00000260803 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260803 Gene

No ASD Table

Relevant External Links for ENSG00000260803 Gene

GeneLoc Exon Structure for
ENSG00000260803

No data available for mRNA/cDNA for ENSG00000260803 Gene

Expression for ENSG00000260803 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260803 Gene

genes like me logo Genes that share expression patterns with ENSG00000260803: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260803 Gene

Orthologs for ENSG00000260803 Gene

Evolution for ENSG00000260803 Gene

ENSEMBL:
Gene Tree for ENSG00000260803 (if available)
TreeFam:
Gene Tree for ENSG00000260803 (if available)

No data available for Orthologs for ENSG00000260803 Gene

Paralogs for ENSG00000260803 Gene

No data available for Paralogs for ENSG00000260803 Gene

Variants for ENSG00000260803 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260803 Gene

Disorders for ENSG00000260803 Gene

No disorders were found for ENSG00000260803 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260803 Gene

Publications for ENSG00000260803 Gene

No publications were found for ENSG00000260803 Gene.

No data available for Mastermind for ENSG00000260803 Gene

Products for ENSG00000260803 Gene

Sources for ENSG00000260803 Gene