Aliases for ENSG00000260771 Gene

Subcategory (RNA class) for ENSG00000260771 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000260771 Gene

  • Novel Transcript 5
  • NONHSAG045449 92
  • Lnc-SMOC2-3 168
  • AL138918.1 5

External Ids for ENSG00000260771 Gene

Previous GeneCards Identifiers for ENSG00000260771 Gene

  • GC06P168775

Summaries for ENSG00000260771 Gene

GeneCards Summary for ENSG00000260771 Gene

ENSG00000260771 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260771 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260771 Gene

Genomics for ENSG00000260771 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260771 Gene

Promoters and enhancers for ENSG00000260771 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J168372 Enhancer 0.2 ENCODE 500.7 -1.7 -1731 0 ENSG00000260771 HSALNG0055265
GH06J168369 Enhancer 1 Ensembl ENCODE 0.7 -4.3 -4334 0.8 CTCF MYC USF1 GABPA ZBTB26 TRIM28 REST CTBP1 SMC3 ZNF316 DACT2 ENSG00000260771 HSALNG0055265
GH06J168355 Enhancer 0.8 Ensembl 0.4 -18.6 -18597 0.6 CTCF GABPA REST ZBTB25 SKI ZBTB26 SMC3 ZNF263 PTBP1 RAD21 DACT2 HSALNG0055265 ENSG00000260771
GH06J168383 Enhancer 0.5 Ensembl 0.4 +8.8 8804 0.2 GABPA NFATC1 BCL3 ZNF184 TARDBP HDAC2 ZSCAN4 MNT MAX HDAC1 SMOC2 HSALNG0055271 ENSG00000260771
GH06J168376 Enhancer 0.3 Ensembl ENCODE 0.7 +3.1 3143 1.7 SMOC2 ENSG00000260771 HSALNG0055271
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260771 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260771 Gene

Genomic Locations for ENSG00000260771 Gene
chr6:168,374,697-168,375,355
(GRCh38/hg38)
Size:
659 bases
Orientation:
Plus strand
chr6:168,775,377-168,776,035
(GRCh37/hg19)
Size:
659 bases
Orientation:
Plus strand

Genomic View for ENSG00000260771 Gene

Genes around ENSG00000260771 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260771 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260771 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260771 Gene

Proteins for ENSG00000260771 Gene

Post-translational modifications for ENSG00000260771 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260771 Gene

Domains & Families for ENSG00000260771 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260771 Gene

Function for ENSG00000260771 Gene

Phenotypes From GWAS Catalog for ENSG00000260771 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260771 Gene

Localization for ENSG00000260771 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260771 Gene

Pathways & Interactions for ENSG00000260771 Gene

PathCards logo

SuperPathways for ENSG00000260771 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260771 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260771 Gene

Drugs & Compounds for ENSG00000260771 Gene

No Compound Related Data Available

Transcripts for ENSG00000260771 Gene

mRNA/cDNA for ENSG00000260771 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260771 Gene

No ASD Table

Relevant External Links for ENSG00000260771 Gene

GeneLoc Exon Structure for
ENSG00000260771

Expression for ENSG00000260771 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260771 Gene

genes like me logo Genes that share expression patterns with ENSG00000260771: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260771 Gene

Orthologs for ENSG00000260771 Gene

Evolution for ENSG00000260771 Gene

ENSEMBL:
Gene Tree for ENSG00000260771 (if available)
TreeFam:
Gene Tree for ENSG00000260771 (if available)

No data available for Orthologs for ENSG00000260771 Gene

Paralogs for ENSG00000260771 Gene

No data available for Paralogs for ENSG00000260771 Gene

Variants for ENSG00000260771 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260771 Gene

Disorders for ENSG00000260771 Gene

No disorders were found for ENSG00000260771 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260771 Gene

Publications for ENSG00000260771 Gene

No publications were found for ENSG00000260771 Gene.

No data available for Mastermind for ENSG00000260771 Gene

Products for ENSG00000260771 Gene

Sources for ENSG00000260771 Gene