Aliases for ENSG00000260756 Gene

Subcategory (RNA class) for ENSG00000260756 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000260756 Gene

  • Novel Transcript 5
  • NONHSAG018563.2 91
  • Lnc-GRIN2A-2 165
  • AC131649.1 5

External Ids for ENSG00000260756 Gene

Previous GeneCards Identifiers for ENSG00000260756 Gene

  • GC16M010445

Summaries for ENSG00000260756 Gene

GeneCards Summary for ENSG00000260756 Gene

ENSG00000260756 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260756 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260756 Gene

Genomics for ENSG00000260756 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260756 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J010356 Enhancer 1 Ensembl ENCODE 0.7 -4.8 -4783 2.1 HNRNPL GATAD2A LEF1 SOX13 RCOR2 RBFOX2 RXRB DPF2 HDAC1 SOX6 ATF7IP2 EMP2 ENSG00000260756 piR-49097-040 lnc-ATF7IP2-3
GH16J010361 Enhancer 1.2 Ensembl ENCODE 0.4 -9.9 -9946 2.6 GATAD2A TFE3 ZNF512 LEF1 IKZF1 NFKBIZ JUND ZNF143 RBFOX2 PKNOX1 ATF7IP2 HNRNPCP4 GRIN2A ENSG00000260756 piR-49097-040 lnc-ATF7IP2-3 EMP2
GH16J010327 Enhancer 1.1 Ensembl ENCODE 0.4 +21.2 21203 7.3 SP1 GATAD2A RCOR2 JUND TCF12 IKZF2 ZNF740 TRIM22 DPF2 YY1 CLEC16A lnc-NUBP1-5 ATF7IP2 lnc-ATF7IP2-3 ENSG00000260756 EMP2
GH16J010343 Enhancer 0.8 ENCODE 0.4 +9.4 9436 0.2 PKNOX1 ZNF24 NR2C1 DPF2 HDAC1 SOX6 TCF12 EP300 MTA3 CTBP1 ENSG00000260756 ATF7IP2 lnc-NUBP1-5 lnc-ATF7IP2-3 EMP2
GH16J010339 Enhancer 0.9 Ensembl ENCODE 0.4 +12.4 12407 1.3 IKZF1 ZNF143 NR2C1 SOX6 CBX3 ZNF444 XRCC3 TRIM28 TRIM24 EHMT2 HNRNPCP4 SOCS1 ENSG00000260756 ATF7IP2 lnc-NUBP1-5 lnc-ATF7IP2-3 EMP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260756 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260756 Gene

Genomic Locations for ENSG00000260756 Gene
chr16:10,351,440-10,352,755
(GRCh38/hg38)
Size:
1,316 bases
Orientation:
Minus strand
chr16:10,445,297-10,446,609
(GRCh37/hg19)
Size:
1,313 bases
Orientation:
Minus strand

Genomic View for ENSG00000260756 Gene

Genes around ENSG00000260756 on UCSC Golden Path with GeneCards custom track
ENSG00000260756 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260756 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260756 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260756 Gene

Proteins for ENSG00000260756 Gene

Post-translational modifications for ENSG00000260756 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260756 Gene

Domains & Families for ENSG00000260756 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260756 Gene

Function for ENSG00000260756 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260756 Gene

Localization for ENSG00000260756 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260756 Gene

Pathways & Interactions for ENSG00000260756 Gene

PathCards logo

SuperPathways for ENSG00000260756 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260756 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260756 Gene

Drugs & Compounds for ENSG00000260756 Gene

No Compound Related Data Available

Transcripts for ENSG00000260756 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260756 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002C82AE_9606 lncRNA 1313 2

Ensembl: ENST00000569215 (view in UCSC) ,

LNCipedia: lnc-GRIN2A-2:1,

URS00008B2259_9606 lncRNA 1316 2

LNCipedia: lnc-GRIN2A-2:2,

NONCODE: NONHSAT140498.2,

ENSG00000260756 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260756 Gene

No ASD Table

Relevant External Links for ENSG00000260756 Gene

GeneLoc Exon Structure for
ENSG00000260756

No data available for mRNA/cDNA for ENSG00000260756 Gene

Expression for ENSG00000260756 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260756 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260756 Gene

This gene is overexpressed in Testis (x47.3).
genes like me logo Genes that share expression patterns with ENSG00000260756: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260756 Gene

Orthologs for ENSG00000260756 Gene

Evolution for ENSG00000260756 Gene

ENSEMBL:
Gene Tree for ENSG00000260756 (if available)
TreeFam:
Gene Tree for ENSG00000260756 (if available)

No data available for Orthologs for ENSG00000260756 Gene

Paralogs for ENSG00000260756 Gene

No data available for Paralogs for ENSG00000260756 Gene

Variants for ENSG00000260756 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260756 Gene

Disorders for ENSG00000260756 Gene

No disorders were found for ENSG00000260756 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260756 Gene

Publications for ENSG00000260756 Gene

No publications were found for ENSG00000260756 Gene.

No data available for Mastermind for ENSG00000260756 Gene

Products for ENSG00000260756 Gene

Sources for ENSG00000260756 Gene